| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is tolQ [H]
Identifier: 29348078
GI number: 29348078
Start: 3323501
End: 3324298
Strand: Reverse
Name: tolQ [H]
Synonym: BT_2668
Alternate gene names: 29348078
Gene position: 3324298-3323501 (Counterclockwise)
Preceding gene: 29348079
Following gene: 29348077
Centisome position: 53.1
GC content: 42.23
Gene sequence:
>798_bases ATGGAAACTACTAAAAAGTCTCAGATTGTAGGTATAAAGAATGCCGGTATCGTAATCATCTGCTGTTTCATTGTAGCAGT GTGTATTTTTCAGTTCCTGTTGGGAAATCCGTCTAACTTTATGAACAATGACCCTAACAACCATCCATTGAACATGTTGG GTACCATTTACAAAGGTGGTGTGATTGTGCCTGTTATTCAGACACTGTTGTTAACTGTACTCGCTTTGAGTATTGAACGC TTTTTTGCTCTTCGTTCTGCTTTCGGTAAAGGCTCGTTGGCTAAATTTGTAGCTAACATCAAAGAAGCTCTGGCTGCCGG TGACCTTAAGAAAGCACAAGAGATTTGTGACAAACAACGCGGTTCTGTTGCCAATGTAGTTACTGCTACTTTGCGCAAGT ATGAAGAAATGGAAAAGAACACTGCTTTGCCTAAAGAACAAAAGCTGCTGGCTATCCAGAAAGAACTGGAAGAAGCAACT GCTCTGGAAATGCCTATGATGCAGCAGAATCTTCCGATTATCGCTACAATTACTACTTTAGGTACATTGATGGGATTGCT CGGTACTGTAATCGGTATGATCCGTTCATTTGCCGCATTGTCCGCCGGTGGTGGTGCCGACTCTATGGCTTTGTCACAAG GTATCTCTGAAGCCTTGATCAATACGGCTTTCGGTATCTTGACAGGTGCGCTGGCTGTTATTTCTTACAACTACTTCACT AACAAAATTGACAAATTGACTTACGGACTCGACGAAGTCGGATTCTCTATCGTGCAGACTTTTGCAGCTACTCATTAA
Upstream 100 bases:
>100_bases TTTCATTCTTGAAAAGTCACAGGGTCTATAGCGCAGTGTATCTAATCATTTGAAAATTTTCTAAATAACTAAAATTAATA TCTTAACAAAAAAACTTATT
Downstream 100 bases:
>100_bases TTTGGCGAACCCTTTAAAATCTATTAATCATGGGTAGAGCGAAAATTAAAAAGAAAGATACGTTCATAGATATGACCGCT ATGAGTGACGTAACTGTATT
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues METTKKSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPLNMLGTIYKGGVIVPVIQTLLLTVLALSIER FFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQRGSVANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEAT ALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFT NKIDKLTYGLDEVGFSIVQTFAATH
Sequences:
>Translated_265_residues METTKKSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPLNMLGTIYKGGVIVPVIQTLLLTVLALSIER FFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQRGSVANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEAT ALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFT NKIDKLTYGLDEVGFSIVQTFAATH >Mature_265_residues METTKKSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPLNMLGTIYKGGVIVPVIQTLLLTVLALSIER FFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQRGSVANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEAT ALEMPMMQQNLPIIATITTLGTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFT NKIDKLTYGLDEVGFSIVQTFAATH
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 28399; Mature: 28399
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTKKSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPLNMLGTIYKGG CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCC VIVPVIQTLLLTVLALSIERFFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GSVANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEATALEMPMMQQNLPIIATITTL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKIDKLTYGLDEVGFSIVQTFAATH HHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure METTKKSQIVGIKNAGIVIICCFIVAVCIFQFLLGNPSNFMNNDPNNHPLNMLGTIYKGG CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCC VIVPVIQTLLLTVLALSIERFFALRSAFGKGSLAKFVANIKEALAAGDLKKAQEICDKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHC GSVANVVTATLRKYEEMEKNTALPKEQKLLAIQKELEEATALEMPMMQQNLPIIATITTL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GTLMGLLGTVIGMIRSFAALSAGGGADSMALSQGISEALINTAFGILTGALAVISYNYFT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKIDKLTYGLDEVGFSIVQTFAATH HHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]