Click here to switch to the map view.

The map label for this gene is 29348073

Identifier: 29348073

GI number: 29348073

Start: 3318924

End: 3320375

Strand: Reverse

Name: 29348073

Synonym: BT_2663

Alternate gene names: NA

Gene position: 3320375-3318924 (Counterclockwise)

Preceding gene: 29348074

Following gene: 29348071

Centisome position: 53.04

GC content: 43.66

Gene sequence:

>1452_bases
ATGTTTTTAGCTGGAGCGTTTATAGCAGTTGGGTCGCTCTATGCGCAATCATCTGATGCCGAATGGCAGGCAGGAGTTGC
AAAATTGAAAGAAACCATTCAGACGAATCCGGCTCAGGCCAATGAGGAAGCTGAACAGTTGATAAAAGGAAAGAATAAAA
AGAATGTGGAACTTCTGGTGGCTATCGGCGAGGTATATCTGAAAGCCGGAAAACTTCCGGAAGCACAGGAGTATGCTGCT
CTTGCCAAAAAGGTGAATGGCAAATCGGCTCTTGCCTCCGTACTGGAGGGAGACATCGCCTTTGAGCAGAAAAACGCCGG
TCTGGCATCTCAGAAATATGAAGAAGCTATCTATTTCGATCCGAGTTGCACAGAAGCATATCTGAGATATGCGGATATTT
ATAAATCAGCCAATGCTGCTCTGGCCATTGAAAAACTGGAACAGCTGAAAGCCCAGGAACCGTCCAACACAGCCGTAGAT
AAGAAACTTGCCGAAATCTATTATTTGAAGAATGATTTTAGTAAAGCTGCCGAAGCTTATTCGCGTTTTGCGATGGGACC
GACAGCGACAGAAGAGGATTTAGTGAAATATGCATTTGCCCTCTTCCTGAACCATGACTTCGAGAAGTCACTTGAAGTGG
CGAATATGGGATTGAAAAAGAATGCGCGTCACGCGGCGTTCAATCGCCTGGCAATGTATAATTATACAGACCTGAAGCGC
TTTGATGAAGCAATAAAAGCGGCGGATGCTTTTTTTACCGAATCGGACAAGGCTGATTATTCATATCTTGACTATATGTA
TTACGGGCATTTGCTCGAAGCTCTGAAGAAATATGATGAAGCTGTAGGACAATATGAGAAAGCCATACAATTAGATCCGA
CAAAGACGGACTTATACAAAAATATCTCTTCTGCCTATGAACAGAAGAATGATTATAAAAAAGCAATTAGTGCTTACCAG
AAATATTATACATCCCTTGATAAAGAACATCAGACTCCGGATTTACAATTCCAGTTTGGCAGACTTTATTATGGTGCAGG
TACGCAGACTGATTCGCTGACAATCAATGCTGAAGAGCGCAAGCAGGCTTTGATGGCCGCTGATTCTGTTTTCCATTCCA
TCGCAGAAGCAGCACCGGACAGCTACCTGGGTAATTTTTGGAGGGCACGTGCCAATTCCGCACTGGACCCCGAAACGACT
CTTGGACTGGCGAAGCCTTTCTATGAGGAGGTAGCCACCCTGCTGGAAAGCAAGAATGATCCTCATTACAATTCAGCTTT
GATTGAGTGCTACAGTTATCTTGGATATTACTACTTATTGGCTATTGAAAATCCGGCACTGAAAGCGGAAGCAATGGCGA
ATAAAGAAAAATCTAAGGAGTATTGGAGCAAAATTCTGGCTATAGACTCCACTAATGCTACTGCTAAAAGGGCATTGGAT
GGCATCAAATAG

Upstream 100 bases:

>100_bases
ATTAAAATCTGGACTTGTTCCGGCTACTCAGCCAGTGCGTATTGTCCATGTGAAAGACGAATAATAACTAAAATTAGAGA
CTATCATGAAAAGAGTACAA

Downstream 100 bases:

>100_bases
TGAATAATTTTAGTTGTTTGTCGTGACAGGAGGAGTGGAGAGTGATCTTAGCTCCTCCTTTTTTTTATTGTCACGTTTAG
CTGTTTTTCAGTCTGTTACA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR-Repeat Family Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MFLAGAFIAVGSLYAQSSDAEWQAGVAKLKETIQTNPAQANEEAEQLIKGKNKKNVELLVAIGEVYLKAGKLPEAQEYAA
LAKKVNGKSALASVLEGDIAFEQKNAGLASQKYEEAIYFDPSCTEAYLRYADIYKSANAALAIEKLEQLKAQEPSNTAVD
KKLAEIYYLKNDFSKAAEAYSRFAMGPTATEEDLVKYAFALFLNHDFEKSLEVANMGLKKNARHAAFNRLAMYNYTDLKR
FDEAIKAADAFFTESDKADYSYLDYMYYGHLLEALKKYDEAVGQYEKAIQLDPTKTDLYKNISSAYEQKNDYKKAISAYQ
KYYTSLDKEHQTPDLQFQFGRLYYGAGTQTDSLTINAEERKQALMAADSVFHSIAEAAPDSYLGNFWRARANSALDPETT
LGLAKPFYEEVATLLESKNDPHYNSALIECYSYLGYYYLLAIENPALKAEAMANKEKSKEYWSKILAIDSTNATAKRALD
GIK

Sequences:

>Translated_483_residues
MFLAGAFIAVGSLYAQSSDAEWQAGVAKLKETIQTNPAQANEEAEQLIKGKNKKNVELLVAIGEVYLKAGKLPEAQEYAA
LAKKVNGKSALASVLEGDIAFEQKNAGLASQKYEEAIYFDPSCTEAYLRYADIYKSANAALAIEKLEQLKAQEPSNTAVD
KKLAEIYYLKNDFSKAAEAYSRFAMGPTATEEDLVKYAFALFLNHDFEKSLEVANMGLKKNARHAAFNRLAMYNYTDLKR
FDEAIKAADAFFTESDKADYSYLDYMYYGHLLEALKKYDEAVGQYEKAIQLDPTKTDLYKNISSAYEQKNDYKKAISAYQ
KYYTSLDKEHQTPDLQFQFGRLYYGAGTQTDSLTINAEERKQALMAADSVFHSIAEAAPDSYLGNFWRARANSALDPETT
LGLAKPFYEEVATLLESKNDPHYNSALIECYSYLGYYYLLAIENPALKAEAMANKEKSKEYWSKILAIDSTNATAKRALD
GIK
>Mature_483_residues
MFLAGAFIAVGSLYAQSSDAEWQAGVAKLKETIQTNPAQANEEAEQLIKGKNKKNVELLVAIGEVYLKAGKLPEAQEYAA
LAKKVNGKSALASVLEGDIAFEQKNAGLASQKYEEAIYFDPSCTEAYLRYADIYKSANAALAIEKLEQLKAQEPSNTAVD
KKLAEIYYLKNDFSKAAEAYSRFAMGPTATEEDLVKYAFALFLNHDFEKSLEVANMGLKKNARHAAFNRLAMYNYTDLKR
FDEAIKAADAFFTESDKADYSYLDYMYYGHLLEALKKYDEAVGQYEKAIQLDPTKTDLYKNISSAYEQKNDYKKAISAYQ
KYYTSLDKEHQTPDLQFQFGRLYYGAGTQTDSLTINAEERKQALMAADSVFHSIAEAAPDSYLGNFWRARANSALDPETT
LGLAKPFYEEVATLLESKNDPHYNSALIECYSYLGYYYLLAIENPALKAEAMANKEKSKEYWSKILAIDSTNATAKRALD
GIK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54087; Mature: 54087

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAGAFIAVGSLYAQSSDAEWQAGVAKLKETIQTNPAQANEEAEQLIKGKNKKNVELLV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
AIGEVYLKAGKLPEAQEYAALAKKVNGKSALASVLEGDIAFEQKNAGLASQKYEEAIYFD
EHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHCCCEEEC
PSCTEAYLRYADIYKSANAALAIEKLEQLKAQEPSNTAVDKKLAEIYYLKNDFSKAAEAY
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SRFAMGPTATEEDLVKYAFALFLNHDFEKSLEVANMGLKKNARHAAFNRLAMYNYTDLKR
HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH
FDEAIKAADAFFTESDKADYSYLDYMYYGHLLEALKKYDEAVGQYEKAIQLDPTKTDLYK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHH
NISSAYEQKNDYKKAISAYQKYYTSLDKEHQTPDLQFQFGRLYYGAGTQTDSLTINAEER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEECCCCCCCCEEECHHHH
KQALMAADSVFHSIAEAAPDSYLGNFWRARANSALDPETTLGLAKPFYEEVATLLESKND
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PHYNSALIECYSYLGYYYLLAIENPALKAEAMANKEKSKEYWSKILAIDSTNATAKRALD
CCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHC
GIK
CCC
>Mature Secondary Structure
MFLAGAFIAVGSLYAQSSDAEWQAGVAKLKETIQTNPAQANEEAEQLIKGKNKKNVELLV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
AIGEVYLKAGKLPEAQEYAALAKKVNGKSALASVLEGDIAFEQKNAGLASQKYEEAIYFD
EHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHCCCEEEC
PSCTEAYLRYADIYKSANAALAIEKLEQLKAQEPSNTAVDKKLAEIYYLKNDFSKAAEAY
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SRFAMGPTATEEDLVKYAFALFLNHDFEKSLEVANMGLKKNARHAAFNRLAMYNYTDLKR
HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH
FDEAIKAADAFFTESDKADYSYLDYMYYGHLLEALKKYDEAVGQYEKAIQLDPTKTDLYK
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHH
NISSAYEQKNDYKKAISAYQKYYTSLDKEHQTPDLQFQFGRLYYGAGTQTDSLTINAEER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEECCCCCCCCEEECHHHH
KQALMAADSVFHSIAEAAPDSYLGNFWRARANSALDPETTLGLAKPFYEEVATLLESKND
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PHYNSALIECYSYLGYYYLLAIENPALKAEAMANKEKSKEYWSKILAIDSTNATAKRALD
CCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHC
GIK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA