| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is pstS [H]
Identifier: 29348074
GI number: 29348074
Start: 3320412
End: 3321356
Strand: Reverse
Name: pstS [H]
Synonym: BT_2664
Alternate gene names: 29348074
Gene position: 3321356-3320412 (Counterclockwise)
Preceding gene: 29348075
Following gene: 29348073
Centisome position: 53.05
GC content: 46.98
Gene sequence:
>945_bases ATGATGAAGAGACAATTTTGGCTGGTAGGAATCGTTTTGTTGGCGGTGTTGAGTGCTTGCCGTTCCAAATCGGATGGACC GACGGATACGTATTCGTCTGGGGTGATATCTATTGCGGCGGATGAAAGTTTTGAGCCTATTATACAGGAAGAGATAGATG TGTTTGAAAGTCTGTATCCTTTGGCCGGAATTGTCCCTCGCTACACGACGGAAGTCGAGGCTATTAATTTACTTCTGAAA GACAGTGTCCGGTTGGCTATTGCAACCCGGACATTGACTGAGGAAGAAATGAATTCCTTTCACAGCCGCAAGTTCTTTCC CCGCGAGATTAAGCTTGCTACAGATGGTCTGGCATTAATCGTCAACCGGGACAATCCGGATTCTTTGTTGACCGTACGGG ATTTCAGCCGCATCCTCACTGGTGAGGCGAAAGACTGGAAGGATATAAATCCGAACTCCCGCCTGAAGAGTATTCAGGTG GTGTTCGATAATAAAAACTCCAGCACCGTACGCTATACAATGGATTCTATCTGTGGTGGAAAACCACTGGCTACTGACAA TGTCAGTGCCTTGAAGACCAATCAGCAGGTGATAAAGTATGTAGCAGAGAATCCCGGAGCAATGGGAGTCATTGGTGTGA ACTGGCTGGGCAACCGCAGCGACACCACCAACCTTTCTTTCACCGAGGAAATCAGAGTAATGGCAGTGAGTGCGGAGGAT GTAGCTACTCCTGCTAACAGTTATAAGCCTTATCAGGCTTACTTGTATTACGGTAACTATCCATTGGCACGACCCATTTA CGCATTACTGAATGATCCTCGCAGTGCGCTGCCTTGGGGATTTGCTTCTTTTATGACATCCGACAAAGGGCAGCGGATTA TATTAAAATCTGGACTTGTTCCGGCTACTCAGCCAGTGCGTATTGTCCATGTGAAAGACGAATAA
Upstream 100 bases:
>100_bases CGTGTGGTACAAAGTATGCCGAAATGGATTCCTGGTAAACAAAATGGTAAAGCGGTACGTGTGAAATTCACCGTTCCGGT AATGTTTAGATTACAGTAAG
Downstream 100 bases:
>100_bases TAACTAAAATTAGAGACTATCATGAAAAGAGTACAAATGTTTTTAGCTGGAGCGTTTATAGCAGTTGGGTCGCTCTATGC GCAATCATCTGATGCCGAAT
Product: putative phosphate ABC transporter phosphate-binding component
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MMKRQFWLVGIVLLAVLSACRSKSDGPTDTYSSGVISIAADESFEPIIQEEIDVFESLYPLAGIVPRYTTEVEAINLLLK DSVRLAIATRTLTEEEMNSFHSRKFFPREIKLATDGLALIVNRDNPDSLLTVRDFSRILTGEAKDWKDINPNSRLKSIQV VFDNKNSSTVRYTMDSICGGKPLATDNVSALKTNQQVIKYVAENPGAMGVIGVNWLGNRSDTTNLSFTEEIRVMAVSAED VATPANSYKPYQAYLYYGNYPLARPIYALLNDPRSALPWGFASFMTSDKGQRIILKSGLVPATQPVRIVHVKDE
Sequences:
>Translated_314_residues MMKRQFWLVGIVLLAVLSACRSKSDGPTDTYSSGVISIAADESFEPIIQEEIDVFESLYPLAGIVPRYTTEVEAINLLLK DSVRLAIATRTLTEEEMNSFHSRKFFPREIKLATDGLALIVNRDNPDSLLTVRDFSRILTGEAKDWKDINPNSRLKSIQV VFDNKNSSTVRYTMDSICGGKPLATDNVSALKTNQQVIKYVAENPGAMGVIGVNWLGNRSDTTNLSFTEEIRVMAVSAED VATPANSYKPYQAYLYYGNYPLARPIYALLNDPRSALPWGFASFMTSDKGQRIILKSGLVPATQPVRIVHVKDE >Mature_314_residues MMKRQFWLVGIVLLAVLSACRSKSDGPTDTYSSGVISIAADESFEPIIQEEIDVFESLYPLAGIVPRYTTEVEAINLLLK DSVRLAIATRTLTEEEMNSFHSRKFFPREIKLATDGLALIVNRDNPDSLLTVRDFSRILTGEAKDWKDINPNSRLKSIQV VFDNKNSSTVRYTMDSICGGKPLATDNVSALKTNQQVIKYVAENPGAMGVIGVNWLGNRSDTTNLSFTEEIRVMAVSAED VATPANSYKPYQAYLYYGNYPLARPIYALLNDPRSALPWGFASFMTSDKGQRIILKSGLVPATQPVRIVHVKDE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34911; Mature: 34911
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRQFWLVGIVLLAVLSACRSKSDGPTDTYSSGVISIAADESFEPIIQEEIDVFESLYP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LAGIVPRYTTEVEAINLLLKDSVRLAIATRTLTEEEMNSFHSRKFFPREIKLATDGLALI HHHCCCCCCHHHHHHHHHHHCCEEEEEEEHHHCHHHHHHHHHCCCCCCEEEEECCCEEEE VNRDNPDSLLTVRDFSRILTGEAKDWKDINPNSRLKSIQVVFDNKNSSTVRYTMDSICGG EECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCC KPLATDNVSALKTNQQVIKYVAENPGAMGVIGVNWLGNRSDTTNLSFTEEIRVMAVSAED CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEHHH VATPANSYKPYQAYLYYGNYPLARPIYALLNDPRSALPWGFASFMTSDKGQRIILKSGLV HCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCEEEEECCCC PATQPVRIVHVKDE CCCCCEEEEEECCC >Mature Secondary Structure MMKRQFWLVGIVLLAVLSACRSKSDGPTDTYSSGVISIAADESFEPIIQEEIDVFESLYP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LAGIVPRYTTEVEAINLLLKDSVRLAIATRTLTEEEMNSFHSRKFFPREIKLATDGLALI HHHCCCCCCHHHHHHHHHHHCCEEEEEEEHHHCHHHHHHHHHCCCCCCEEEEECCCEEEE VNRDNPDSLLTVRDFSRILTGEAKDWKDINPNSRLKSIQVVFDNKNSSTVRYTMDSICGG EECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCC KPLATDNVSALKTNQQVIKYVAENPGAMGVIGVNWLGNRSDTTNLSFTEEIRVMAVSAED CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEEHHH VATPANSYKPYQAYLYYGNYPLARPIYALLNDPRSALPWGFASFMTSDKGQRIILKSGLV HCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCEEEEECCCC PATQPVRIVHVKDE CCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA