Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348070

Identifier: 29348070

GI number: 29348070

Start: 3315518

End: 3316108

Strand: Reverse

Name: 29348070

Synonym: BT_2660

Alternate gene names: NA

Gene position: 3316108-3315518 (Counterclockwise)

Preceding gene: 29348071

Following gene: 29348069

Centisome position: 52.97

GC content: 39.76

Gene sequence:

>591_bases
ATGAAAAAAAACAAATTGAAACTGTATGCAATTATGATTTTTGTGCTTCTCTGCACAGAAGTACATTGTCAGAAAGTAGC
AATCAAAAGCAATTTATTGTATGATGTTACTGCAACTGTTAATGCAGGAATAGAAGTTGGCCTTGCTCCGAAATGGACAT
TTGATCTTTCCGCTAACTATAATGGCTGGACTTTTTCACATGAGCGTAAGTGGAAACATTGGCTTCTGCAACCAGAAGGA
CGTTATTGGTTTTGTGATCGTTTCGCTGGTCATTTTGTTGGTGTTCATGCTTTGGGTGGGCAGTATAACATTGGTAATCT
GAACAATCATATTTCGTTTCTTGGAACAGATTTATCTGTGCTTTCTGATCGTCGTTATCAAGGTTGGTTTGCCGGTGGTG
GCATTGCGTATGGTTATGCGTGGATATTGAACAAACGTTGGAATTTGGAAGCGGAGTTAGGTTTGGGCTGGATTTATACT
CGCTACGACAGTTATCCCTGTGCCCAATGCGGTACAAAAATAGCCGATGGAAAATCGCATAATTATGTTGGGCCCACAAA
AGCGGCAGTCAATCTCATATATACTTTTTAA

Upstream 100 bases:

>100_bases
ACGCATGTCTAAAATATTTCTATTTCCGATATATAGGACGAATGTGGTTTGAGATATATGCGTGTATGTGTGAATTTAGT
AATATATAATACTTATATAT

Downstream 100 bases:

>100_bases
ATCACACAAATTACGGATATGAATAGAACAACAAAAATACTTTGTAGTAGTTTGCTATTCCTACTCTTGATGATAGGAGC
AAAGGCTCAAACAATAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKNKLKLYAIMIFVLLCTEVHCQKVAIKSNLLYDVTATVNAGIEVGLAPKWTFDLSANYNGWTFSHERKWKHWLLQPEG
RYWFCDRFAGHFVGVHALGGQYNIGNLNNHISFLGTDLSVLSDRRYQGWFAGGGIAYGYAWILNKRWNLEAELGLGWIYT
RYDSYPCAQCGTKIADGKSHNYVGPTKAAVNLIYTF

Sequences:

>Translated_196_residues
MKKNKLKLYAIMIFVLLCTEVHCQKVAIKSNLLYDVTATVNAGIEVGLAPKWTFDLSANYNGWTFSHERKWKHWLLQPEG
RYWFCDRFAGHFVGVHALGGQYNIGNLNNHISFLGTDLSVLSDRRYQGWFAGGGIAYGYAWILNKRWNLEAELGLGWIYT
RYDSYPCAQCGTKIADGKSHNYVGPTKAAVNLIYTF
>Mature_196_residues
MKKNKLKLYAIMIFVLLCTEVHCQKVAIKSNLLYDVTATVNAGIEVGLAPKWTFDLSANYNGWTFSHERKWKHWLLQPEG
RYWFCDRFAGHFVGVHALGGQYNIGNLNNHISFLGTDLSVLSDRRYQGWFAGGGIAYGYAWILNKRWNLEAELGLGWIYT
RYDSYPCAQCGTKIADGKSHNYVGPTKAAVNLIYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22315; Mature: 22315

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKLKLYAIMIFVLLCTEVHCQKVAIKSNLLYDVTATVNAGIEVGLAPKWTFDLSANY
CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEECCEEECCCCCEEEEEECCC
NGWTFSHERKWKHWLLQPEGRYWFCDRFAGHFVGVHALGGQYNIGNLNNHISFLGTDLSV
CCEEECCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEECCHHH
LSDRRYQGWFAGGGIAYGYAWILNKRWNLEAELGLGWIYTRYDSYPCAQCGTKIADGKSH
HCCCCCCCEEECCCHHEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHCCCCCCCCCC
NYVGPTKAAVNLIYTF
CCCCCCHHEEEEEEEC
>Mature Secondary Structure
MKKNKLKLYAIMIFVLLCTEVHCQKVAIKSNLLYDVTATVNAGIEVGLAPKWTFDLSANY
CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEECCEEECCCCCEEEEEECCC
NGWTFSHERKWKHWLLQPEGRYWFCDRFAGHFVGVHALGGQYNIGNLNNHISFLGTDLSV
CCEEECCCCCCEEEEECCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEECCHHH
LSDRRYQGWFAGGGIAYGYAWILNKRWNLEAELGLGWIYTRYDSYPCAQCGTKIADGKSH
HCCCCCCCEEECCCHHEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHCCCCCCCCCC
NYVGPTKAAVNLIYTF
CCCCCCHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA