Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348069

Identifier: 29348069

GI number: 29348069

Start: 3314081

End: 3315421

Strand: Reverse

Name: 29348069

Synonym: BT_2659

Alternate gene names: NA

Gene position: 3315421-3314081 (Counterclockwise)

Preceding gene: 29348070

Following gene: 29348068

Centisome position: 52.96

GC content: 43.03

Gene sequence:

>1341_bases
ATGGGCGGTAATGTGACAGTATCTGACCTTGCCGTGTCTCGTTCGGAAGATAAATTGTTCGTATCAATGGATATTGATGT
TTCGGCATTGAGTGTAAAAAGTAACCGTGAAGTGATTCTTACGCCTAGACTGTCAGGAGAAGGTAATGAACTGAACTTAC
CTTCGGTGATGATAGCTGGTCGCAACCGCTATTATCATCATCTGCGCAATGGCTTGTGTACGGATGATATGATGCTTTAT
CAAAAAAGCAAAGTATCTGTGGTCAAATATCGTACAGTGGTACCTTATGCCGATTGGATGAAACGTGCCACGCTCAGTAC
GGGCAATGAAACATGCGGTTGTTGCGGCGAGGCACTTGTTGATGGCAACGAGCCTCTGTTGGTGCTTCAGTTGGAGCCGA
AAGAATTTGTGCCTGCCTATGTATACATTCGTCCGAAAGCAGAACCAAAAATTAATGTATTGGAAGGTTCGGCTTATATT
GACTTTCCTGTGAACCGAACAGAAATCCATGAGAATTATCGTCGTAATCCGGCTGAATTACAAAAGATACTTAATACTAT
TGATGCGGTGAAGAATGATGTGGATACACGGATTATCTCTGTCAGCATCAAAGGATATGCTTCGCCTGAAAGTCCCTATT
CGAATAATGAACGTCTGGCGATGGGACGAACGAAAACATTGAAAGAGTATGTACGCAAACAGTACGATTTTGCCGATTCA
CTATTCATTACCGATAACGAGCCGGAAGATTGGGCAGGACTCGAACGTTATGTGGAAAACTCGTATCTCGAAAACAAAGC
AGGTATTCTGGCATTAATCCGCAGTAACCAGGAACCGGATGCAAAAGAACGTAGCATCAAGACTGCCTTTCCAAAAGATT
ATGCATTCTTACTGAAAGAGGTTTATCCGGGGCTTCGTCATTCAGACTATGCAGTCAAATATGAAGTGCGTACCTATACT
GATATCAACGAAATCAAGCGTCTGATTAAAACACAGCCACAGAAGTTAAGTTTGAATGAGATGTATCTTGCCGCACAGGA
TATGAAACTGGGGAGTGAAGAATATAATGAAACATTCGAAGTCGCTGTACGTATGTTCCCTGATGATGAAGTGGCTAATC
TGAATGCTGCAAATGCCGCAATGGCTAGGGGGGATATGAAGAATGCGGAATATTATCTGAAGAAAGCTGGAAACTCACCG
CAGGCTGTTTATGGTCGGGGGACATACGCTGCCTTGAAGAAGGAGTTTGATATGGCAGAGAAAATGTTTACTGAAGCTGC
ACATAGGGGGCTGGCTGATGCAGAGGAGATGTTAAAGCAAATAGAAGAGATAAAACATTAA

Upstream 100 bases:

>100_bases
TTAAATCACACAAATTACGGATATGAATAGAACAACAAAAATACTTTGTAGTAGTTTGCTATTCCTACTCTTGATGATAG
GAGCAAAGGCTCAAACAATA

Downstream 100 bases:

>100_bases
CAGGATCTAAATATAAAAACATAGAAATTATTAATTCATTCAAAGTTGCAGATTATGAAAAGAATTAGCAAGTATTTTTT
ATGCCTTTTTGCCGTAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLY
QKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYI
DFPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS
LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYT
DINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSP
QAVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH

Sequences:

>Translated_446_residues
MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLY
QKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYI
DFPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS
LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYT
DINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSP
QAVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH
>Mature_445_residues
GGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLYQ
KSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYID
FPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADSL
FITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYTD
INEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQ
AVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50601; Mature: 50470

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAG
CCCCEEEHHEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEC
RNRYYHHLRNGLCTDDMMLYQKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALV
CCHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHC
DGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYIDFPVNRTEIHENYRRNPAEL
CCCCCEEEEEECCHHHCCEEEEEECCCCCCEEEEECCEEEECCCCHHHHHHHHCCCHHHH
QKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCE
LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKE
EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHCCCHHHHHHHHH
VYPGLRHSDYAVKYEVRTYTDINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFE
HCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCHHHCCEEE
VAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQAVYGRGTYAALKKEFDMAE
EEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH
KMFTEAAHRGLADAEEMLKQIEEIKH
HHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAG
CCCEEEHHEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEC
RNRYYHHLRNGLCTDDMMLYQKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALV
CCHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHC
DGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYIDFPVNRTEIHENYRRNPAEL
CCCCCEEEEEECCHHHCCEEEEEECCCCCCEEEEECCEEEECCCCHHHHHHHHCCCHHHH
QKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCE
LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKE
EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHCCCHHHHHHHHH
VYPGLRHSDYAVKYEVRTYTDINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFE
HCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCHHHCCEEE
VAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQAVYGRGTYAALKKEFDMAE
EEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH
KMFTEAAHRGLADAEEMLKQIEEIKH
HHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA