| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348067
Identifier: 29348067
GI number: 29348067
Start: 3310981
End: 3311997
Strand: Reverse
Name: 29348067
Synonym: BT_2657
Alternate gene names: NA
Gene position: 3311997-3310981 (Counterclockwise)
Preceding gene: 29348068
Following gene: 29348066
Centisome position: 52.9
GC content: 41.0
Gene sequence:
>1017_bases ATGCATAATAAAAAACGAAATATAATTTCAGGGTTTATCAGTACGGTGCTTGGCATCGTACTGATAAATTTTGCCTTTTC ATCGTGTGAGCGTATCTATGAAGATCTTGCTCCATGTCCGCATGGCGTGTCACTACGCTTCATTTACGACTACAATATGG AATATGCCAATGCATTTGCTAAGAAGGTGGATTGTCTGACATTGCTGGTCTATGATGAAAATGGCAATTATGTGGATACT CGCATAGTGACGGGTACGGAGTTGCAGGACGAGAACTATCGCATGAAGCTGGACCTCAAACAAGGAAATTATCATTTCGT AGCTTATGGTGGTCTGGCTTGTAATAAGAGCTCTTTCCTTATGAAGTATACCCCCGGAGAAGGAACTGGATATACCGATT TGCAAGTGGAACTAGATTCGGAATGCTTGACAAATCCCAGACGAAAGAACTTGCACGGTTTGTATTGGGGTGAACTTACT CTCGCTACTGCCGACCTTTACAGTGAAGGCACTGTTGAGATGATGAAGAACACCAATAATATTCGTGTTGTGTTGCAACA AATGAATGGTGAGCCGGTAGATGATAAGAAATTTGAATTTGAAATTACCGATGATAATATACTGTTCAGTTACGATAATA ATTTGCTTGAGAATGGTATGGTGACATACACTCCATGGGCACAAGGGCAAGCTTCGGCAGGATTCACTGATGAGGGAAGA GAAGTGGTGGTAGCTTATGCCGAACTATCTACTTCACGGTTGATGGTGCGTGATTGGTACTCGCCTAAGCTGACGGTGCG TCGCAAAGCAGATGGTGTGGAAATTATCAATATTCCACTTATTAACTATTTGCTTATGCTTAAGAGTGATCTGTATGCAA GCATGGATTCGCAGGAGTTCCTTGATCGTGAAAGTGAATGGTCAATGATATTCTTCTTAAGCCCGAATCTTGAATGGATT AAAACTTATATTAAGATAAACGATTGGACTGTCAGAATCAACGATATAAGACAATGA
Upstream 100 bases:
>100_bases GATACTCCCGATGAGCGAGGTGATATTTATCTGACAGTTTCGGTAGATGTATTGCCTTGGGTAGTTCGTGTCAATAATAT CGATTTCTAAGAAACCAAAG
Downstream 100 bases:
>100_bases AGAAAATCGCATATATCATTATACCATGGGCTATTTCTCTCCTTTTTCGGGGGTGTGCTCATGATGCAGATAGTGAAATG TTTGACAGGGAAGTGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI KTYIKINDWTVRINDIRQ
Sequences:
>Translated_338_residues MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI KTYIKINDWTVRINDIRQ >Mature_338_residues MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI KTYIKINDWTVRINDIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38964; Mature: 38964
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH KKVDCLTLLVYDENGNYVDTRIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFL HCCEEEEEEEECCCCCEEEEEEEECCEECCCCEEEEEEEECCCEEEEEECCEEECCCCEE MKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELTLATADLYSEGTVEMMKNTNN EEECCCCCCCEEEEEEEECHHHHCCCCCCCCCEEEECEEEEEEECCCCCCCCEEHHCCCC IRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCEEECCCCCCCCCCCCCCCCC EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEF EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHH LDRESEWSMIFFLSPNLEWIKTYIKINDWTVRINDIRQ HCCCCCCEEEEEECCCHHEEEEEEEEEEEEEEEEECCC >Mature Secondary Structure MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH KKVDCLTLLVYDENGNYVDTRIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFL HCCEEEEEEEECCCCCEEEEEEEECCEECCCCEEEEEEEECCCEEEEEECCEEECCCCEE MKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELTLATADLYSEGTVEMMKNTNN EEECCCCCCCEEEEEEEECHHHHCCCCCCCCCEEEECEEEEEEECCCCCCCCEEHHCCCC IRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCEEECCCCCCCCCCCCCCCCC EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEF EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHH LDRESEWSMIFFLSPNLEWIKTYIKINDWTVRINDIRQ HCCCCCCEEEEEECCCHHEEEEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA