| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348066
Identifier: 29348066
GI number: 29348066
Start: 3309896
End: 3310984
Strand: Reverse
Name: 29348066
Synonym: BT_2656
Alternate gene names: NA
Gene position: 3310984-3309896 (Counterclockwise)
Preceding gene: 29348067
Following gene: 29348065
Centisome position: 52.89
GC content: 40.22
Gene sequence:
>1089_bases ATGAAGAAAATCGCATATATCATTATACCATGGGCTATTTCTCTCCTTTTTCGGGGGTGTGCTCATGATGCAGATAGTGA AATGTTTGACAGGGAAGTGCCGTTAGTGAATCTTAATATCAGTGTTGCCCTGTCTGACATATCGCAATCGGGTACACGGG CCAGTGACATCTATCCAGAGGCTCCAGTAAATGATAATGAAAAGATGAAAACGTTGCGTATTATTGTCGTACGTAACAAT GATAATATAGTGGAACATAACCGGATTTACAATTTGGAGGTTGCATCTACCGATTGTTATAGCGAGCCGATGAAAGTTAT CGGAAACGAAAAGAAACGAATTTATTTGTTTGCAAATGAAGCTACGGAAATAAAGACAACGGGATTTTTTCCGAAACGTA AATTGGTAGAGTGTGATTTTGAGAAAATTCAGCCCGGAAGCTTATTCTTTACGGATTATATATCCAGTCTGACCATTCGG TTAGGCAGTAATATGGAGCGAATCGACGGTCCGTTGCCGATGAGTGGACTTTATATGGTAGATGTGCCTGCCGAGGATTG TGAACGTGAGCTTTCCATAATGAGAGCGGCTGTTAAATTTACTTTCAATATAACGAATAAAAGCAGTCGGTCCATAGAAA TCACGAAACTGACTATTGATAAAATGGCAGAAAGGGAGTATTACTTGCCACACAATGCTACATATATAGAGAGAGAAACG ACGGAGGGAACAAAGTTCTGGGACATAAATAGTTTCGATGTTCCTACTTTGAAAGGGTATTATACATACGATGCGTCATC GTTGTTTAAAGGGCAACTGCTTCCGGGAGATGAAAATACGAAAACCAATGAGCAACCGATTTACCTGTTGGAGGGGAAGC ATAGTGATGACAACAATAAGGAAAATCCTTATCTGCTGACTTTGGGTGTCAACGGAACTGAATTGAAAAGTTACTTGCCA AATCTGCCACAGTTGCCGCGAAATACACATGTGGTGGTAAATATCACAATTAATGAACATGCAATGGATTGCATAGTAGA TGTGCGTCCTTATACCGAAATCACACTAGAACCCGATTTCGGGTTATAA
Upstream 100 bases:
>100_bases GTGAATGGTCAATGATATTCTTCTTAAGCCCGAATCTTGAATGGATTAAAACTTATATTAAGATAAACGATTGGACTGTC AGAATCAACGATATAAGACA
Downstream 100 bases:
>100_bases AAAAAGAAAGGAAAGATTTCCTTAAATAACTTTATACAGGAAAATATGAAACGCAACATTATTTATAGTCTTACAGGTAT GCTGATATTTGTCTTGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL
Sequences:
>Translated_362_residues MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL >Mature_362_residues MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41285; Mature: 41285
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00449 ATPASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPE CCEEEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC APVNDNEKMKTLRIIVVRNNDNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANE CCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCCCHHCHHHHHCCCCEEEEEEECC ATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIRLGSNMERIDGPLPMSGLYMV CCEEEECCCCCCCCEEECCHHHCCCCCEEHHHHHHHEEEEECCCHHHHCCCCCCCCEEEE DVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET ECCHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCEECCCCCEEEEEEC TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNK CCCCEEEECCCCCCCCCCEEEEECCCHHEECEECCCCCCCCCCCCCEEEEECCCCCCCCC ENPYLLTLGVNGTELKSYLPNLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDF CCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCC GL CC >Mature Secondary Structure MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPE CCEEEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC APVNDNEKMKTLRIIVVRNNDNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANE CCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCCCHHCHHHHHCCCCEEEEEEECC ATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIRLGSNMERIDGPLPMSGLYMV CCEEEECCCCCCCCEEECCHHHCCCCCEEHHHHHHHEEEEECCCHHHHCCCCCCCCEEEE DVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET ECCHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCEECCCCCEEEEEEC TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNK CCCCEEEECCCCCCCCCCEEEEECCCHHEECEECCCCCCCCCCCCCEEEEECCCCCCCCC ENPYLLTLGVNGTELKSYLPNLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDF CCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCC GL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA