Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348066

Identifier: 29348066

GI number: 29348066

Start: 3309896

End: 3310984

Strand: Reverse

Name: 29348066

Synonym: BT_2656

Alternate gene names: NA

Gene position: 3310984-3309896 (Counterclockwise)

Preceding gene: 29348067

Following gene: 29348065

Centisome position: 52.89

GC content: 40.22

Gene sequence:

>1089_bases
ATGAAGAAAATCGCATATATCATTATACCATGGGCTATTTCTCTCCTTTTTCGGGGGTGTGCTCATGATGCAGATAGTGA
AATGTTTGACAGGGAAGTGCCGTTAGTGAATCTTAATATCAGTGTTGCCCTGTCTGACATATCGCAATCGGGTACACGGG
CCAGTGACATCTATCCAGAGGCTCCAGTAAATGATAATGAAAAGATGAAAACGTTGCGTATTATTGTCGTACGTAACAAT
GATAATATAGTGGAACATAACCGGATTTACAATTTGGAGGTTGCATCTACCGATTGTTATAGCGAGCCGATGAAAGTTAT
CGGAAACGAAAAGAAACGAATTTATTTGTTTGCAAATGAAGCTACGGAAATAAAGACAACGGGATTTTTTCCGAAACGTA
AATTGGTAGAGTGTGATTTTGAGAAAATTCAGCCCGGAAGCTTATTCTTTACGGATTATATATCCAGTCTGACCATTCGG
TTAGGCAGTAATATGGAGCGAATCGACGGTCCGTTGCCGATGAGTGGACTTTATATGGTAGATGTGCCTGCCGAGGATTG
TGAACGTGAGCTTTCCATAATGAGAGCGGCTGTTAAATTTACTTTCAATATAACGAATAAAAGCAGTCGGTCCATAGAAA
TCACGAAACTGACTATTGATAAAATGGCAGAAAGGGAGTATTACTTGCCACACAATGCTACATATATAGAGAGAGAAACG
ACGGAGGGAACAAAGTTCTGGGACATAAATAGTTTCGATGTTCCTACTTTGAAAGGGTATTATACATACGATGCGTCATC
GTTGTTTAAAGGGCAACTGCTTCCGGGAGATGAAAATACGAAAACCAATGAGCAACCGATTTACCTGTTGGAGGGGAAGC
ATAGTGATGACAACAATAAGGAAAATCCTTATCTGCTGACTTTGGGTGTCAACGGAACTGAATTGAAAAGTTACTTGCCA
AATCTGCCACAGTTGCCGCGAAATACACATGTGGTGGTAAATATCACAATTAATGAACATGCAATGGATTGCATAGTAGA
TGTGCGTCCTTATACCGAAATCACACTAGAACCCGATTTCGGGTTATAA

Upstream 100 bases:

>100_bases
GTGAATGGTCAATGATATTCTTCTTAAGCCCGAATCTTGAATGGATTAAAACTTATATTAAGATAAACGATTGGACTGTC
AGAATCAACGATATAAGACA

Downstream 100 bases:

>100_bases
AAAAAGAAAGGAAAGATTTCCTTAAATAACTTTATACAGGAAAATATGAAACGCAACATTATTTATAGTCTTACAGGTAT
GCTGATATTTGTCTTGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN
DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR
LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET
TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP
NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL

Sequences:

>Translated_362_residues
MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN
DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR
LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET
TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP
NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL
>Mature_362_residues
MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPEAPVNDNEKMKTLRIIVVRNN
DNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANEATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIR
LGSNMERIDGPLPMSGLYMVDVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET
TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNKENPYLLTLGVNGTELKSYLP
NLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41285; Mature: 41285

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPE
CCEEEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
APVNDNEKMKTLRIIVVRNNDNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANE
CCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCCCHHCHHHHHCCCCEEEEEEECC
ATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIRLGSNMERIDGPLPMSGLYMV
CCEEEECCCCCCCCEEECCHHHCCCCCEEHHHHHHHEEEEECCCHHHHCCCCCCCCEEEE
DVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET
ECCHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCEECCCCCEEEEEEC
TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNK
CCCCEEEECCCCCCCCCCEEEEECCCHHEECEECCCCCCCCCCCCCEEEEECCCCCCCCC
ENPYLLTLGVNGTELKSYLPNLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDF
CCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCC
GL
CC
>Mature Secondary Structure
MKKIAYIIIPWAISLLFRGCAHDADSEMFDREVPLVNLNISVALSDISQSGTRASDIYPE
CCEEEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
APVNDNEKMKTLRIIVVRNNDNIVEHNRIYNLEVASTDCYSEPMKVIGNEKKRIYLFANE
CCCCCCCCEEEEEEEEEECCCCEEECCEEEEEEEECCCCHHCHHHHHCCCCEEEEEEECC
ATEIKTTGFFPKRKLVECDFEKIQPGSLFFTDYISSLTIRLGSNMERIDGPLPMSGLYMV
CCEEEECCCCCCCCEEECCHHHCCCCCEEHHHHHHHEEEEECCCHHHHCCCCCCCCEEEE
DVPAEDCERELSIMRAAVKFTFNITNKSSRSIEITKLTIDKMAEREYYLPHNATYIERET
ECCHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCEECCCCCEEEEEEC
TEGTKFWDINSFDVPTLKGYYTYDASSLFKGQLLPGDENTKTNEQPIYLLEGKHSDDNNK
CCCCEEEECCCCCCCCCCEEEEECCCHHEECEECCCCCCCCCCCCCEEEEECCCCCCCCC
ENPYLLTLGVNGTELKSYLPNLPQLPRNTHVVVNITINEHAMDCIVDVRPYTEITLEPDF
CCCEEEEEECCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEECCCC
GL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA