Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348067

Identifier: 29348067

GI number: 29348067

Start: 3310981

End: 3311997

Strand: Reverse

Name: 29348067

Synonym: BT_2657

Alternate gene names: NA

Gene position: 3311997-3310981 (Counterclockwise)

Preceding gene: 29348068

Following gene: 29348066

Centisome position: 52.9

GC content: 41.0

Gene sequence:

>1017_bases
ATGCATAATAAAAAACGAAATATAATTTCAGGGTTTATCAGTACGGTGCTTGGCATCGTACTGATAAATTTTGCCTTTTC
ATCGTGTGAGCGTATCTATGAAGATCTTGCTCCATGTCCGCATGGCGTGTCACTACGCTTCATTTACGACTACAATATGG
AATATGCCAATGCATTTGCTAAGAAGGTGGATTGTCTGACATTGCTGGTCTATGATGAAAATGGCAATTATGTGGATACT
CGCATAGTGACGGGTACGGAGTTGCAGGACGAGAACTATCGCATGAAGCTGGACCTCAAACAAGGAAATTATCATTTCGT
AGCTTATGGTGGTCTGGCTTGTAATAAGAGCTCTTTCCTTATGAAGTATACCCCCGGAGAAGGAACTGGATATACCGATT
TGCAAGTGGAACTAGATTCGGAATGCTTGACAAATCCCAGACGAAAGAACTTGCACGGTTTGTATTGGGGTGAACTTACT
CTCGCTACTGCCGACCTTTACAGTGAAGGCACTGTTGAGATGATGAAGAACACCAATAATATTCGTGTTGTGTTGCAACA
AATGAATGGTGAGCCGGTAGATGATAAGAAATTTGAATTTGAAATTACCGATGATAATATACTGTTCAGTTACGATAATA
ATTTGCTTGAGAATGGTATGGTGACATACACTCCATGGGCACAAGGGCAAGCTTCGGCAGGATTCACTGATGAGGGAAGA
GAAGTGGTGGTAGCTTATGCCGAACTATCTACTTCACGGTTGATGGTGCGTGATTGGTACTCGCCTAAGCTGACGGTGCG
TCGCAAAGCAGATGGTGTGGAAATTATCAATATTCCACTTATTAACTATTTGCTTATGCTTAAGAGTGATCTGTATGCAA
GCATGGATTCGCAGGAGTTCCTTGATCGTGAAAGTGAATGGTCAATGATATTCTTCTTAAGCCCGAATCTTGAATGGATT
AAAACTTATATTAAGATAAACGATTGGACTGTCAGAATCAACGATATAAGACAATGA

Upstream 100 bases:

>100_bases
GATACTCCCGATGAGCGAGGTGATATTTATCTGACAGTTTCGGTAGATGTATTGCCTTGGGTAGTTCGTGTCAATAATAT
CGATTTCTAAGAAACCAAAG

Downstream 100 bases:

>100_bases
AGAAAATCGCATATATCATTATACCATGGGCTATTTCTCTCCTTTTTCGGGGGTGTGCTCATGATGCAGATAGTGAAATG
TTTGACAGGGAAGTGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT
RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT
LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR
EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI
KTYIKINDWTVRINDIRQ

Sequences:

>Translated_338_residues
MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT
RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT
LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR
EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI
KTYIKINDWTVRINDIRQ
>Mature_338_residues
MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFAKKVDCLTLLVYDENGNYVDT
RIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFLMKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELT
LATADLYSEGTVEMMKNTNNIRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR
EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEFLDRESEWSMIFFLSPNLEWI
KTYIKINDWTVRINDIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38964; Mature: 38964

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH
KKVDCLTLLVYDENGNYVDTRIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFL
HCCEEEEEEEECCCCCEEEEEEEECCEECCCCEEEEEEEECCCEEEEEECCEEECCCCEE
MKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELTLATADLYSEGTVEMMKNTNN
EEECCCCCCCEEEEEEEECHHHHCCCCCCCCCEEEECEEEEEEECCCCCCCCEEHHCCCC
IRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCEEECCCCCCCCCCCCCCCCC
EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEF
EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHH
LDRESEWSMIFFLSPNLEWIKTYIKINDWTVRINDIRQ
HCCCCCCEEEEEECCCHHEEEEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MHNKKRNIISGFISTVLGIVLINFAFSSCERIYEDLAPCPHGVSLRFIYDYNMEYANAFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH
KKVDCLTLLVYDENGNYVDTRIVTGTELQDENYRMKLDLKQGNYHFVAYGGLACNKSSFL
HCCEEEEEEEECCCCCEEEEEEEECCEECCCCEEEEEEEECCCEEEEEECCEEECCCCEE
MKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYWGELTLATADLYSEGTVEMMKNTNN
EEECCCCCCCEEEEEEEECHHHHCCCCCCCCCEEEECEEEEEEECCCCCCCCEEHHCCCC
IRVVLQQMNGEPVDDKKFEFEITDDNILFSYDNNLLENGMVTYTPWAQGQASAGFTDEGR
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCEEECCCCCCCCCCCCCCCCC
EVVVAYAELSTSRLMVRDWYSPKLTVRRKADGVEIINIPLINYLLMLKSDLYASMDSQEF
EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHH
LDRESEWSMIFFLSPNLEWIKTYIKINDWTVRINDIRQ
HCCCCCCEEEEEECCCHHEEEEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA