| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348018
Identifier: 29348018
GI number: 29348018
Start: 3248839
End: 3249303
Strand: Reverse
Name: 29348018
Synonym: BT_2608
Alternate gene names: NA
Gene position: 3249303-3248839 (Counterclockwise)
Preceding gene: 29348019
Following gene: 29348017
Centisome position: 51.9
GC content: 47.53
Gene sequence:
>465_bases ATGACTATGGCAAACAAGAACAGATCCGTCTATAATGTGGACGAGGACGCGCTCAAGCGTATGGTAGCCGGAGATACAAC GGCCTTGGAAAAGATAAGGAAACAGGATGAACGGCCGGAAGAAGATGCCGGTGCCTCCGGAGTGTCGGAAGAAAAAGAAA AGAAACCTGATGTCTCCATTGAGAAGAAACCGTTCGCGGGGAAGAAAACACCGCGGGCATACGGCTTTGATGATTACCGG GAACAATTCCTGCAACAGAAACTGACTGGAGCCAGAAGACAGACTTATATACATGATTCACTGTATAAGGTCCTGGCCAG GGTGCTTCCGGTTATTGCACCGGAAATGTCTGTCCCCACATTTGTGAACAGTGTATTGTCGGACCATCTGAAAAGGTATC AGGATATAATTAACGGAATGTATAATCGGGAAGCGACCCAAAAACCGGTGGAATGGGAACTATAG
Upstream 100 bases:
>100_bases CCGCAGCACCCTGTTTCCGCCTTCCGCCGCCGCTCTGAAAGGAAGCAACTTCGATCTGCTTGCCGCTGAAATGGAAACCA TACTCGGACTTTAACCGGAC
Downstream 100 bases:
>100_bases TTTATTTGTCGATACGCCTTGCCTGTGCCTGTTATATATTATATAAGGTATGTGGGCAGAAAAAGAAGATACGTGAAATT TGCGACCTGCTGTATGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTMANKNRSVYNVDEDALKRMVAGDTTALEKIRKQDERPEEDAGASGVSEEKEKKPDVSIEKKPFAGKKTPRAYGFDDYR EQFLQQKLTGARRQTYIHDSLYKVLARVLPVIAPEMSVPTFVNSVLSDHLKRYQDIINGMYNREATQKPVEWEL
Sequences:
>Translated_154_residues MTMANKNRSVYNVDEDALKRMVAGDTTALEKIRKQDERPEEDAGASGVSEEKEKKPDVSIEKKPFAGKKTPRAYGFDDYR EQFLQQKLTGARRQTYIHDSLYKVLARVLPVIAPEMSVPTFVNSVLSDHLKRYQDIINGMYNREATQKPVEWEL >Mature_153_residues TMANKNRSVYNVDEDALKRMVAGDTTALEKIRKQDERPEEDAGASGVSEEKEKKPDVSIEKKPFAGKKTPRAYGFDDYRE QFLQQKLTGARRQTYIHDSLYKVLARVLPVIAPEMSVPTFVNSVLSDHLKRYQDIINGMYNREATQKPVEWEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17696; Mature: 17565
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMANKNRSVYNVDEDALKRMVAGDTTALEKIRKQDERPEEDAGASGVSEEKEKKPDVSI CCCCCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC EKKPFAGKKTPRAYGFDDYREQFLQQKLTGARRQTYIHDSLYKVLARVLPVIAPEMSVPT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FVNSVLSDHLKRYQDIINGMYNREATQKPVEWEL HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC >Mature Secondary Structure TMANKNRSVYNVDEDALKRMVAGDTTALEKIRKQDERPEEDAGASGVSEEKEKKPDVSI CCCCCCCCCEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC EKKPFAGKKTPRAYGFDDYREQFLQQKLTGARRQTYIHDSLYKVLARVLPVIAPEMSVPT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FVNSVLSDHLKRYQDIINGMYNREATQKPVEWEL HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA