Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348017

Identifier: 29348017

GI number: 29348017

Start: 3248177

End: 3248851

Strand: Reverse

Name: 29348017

Synonym: BT_2607

Alternate gene names: NA

Gene position: 3248851-3248177 (Counterclockwise)

Preceding gene: 29348018

Following gene: 29348015

Centisome position: 51.9

GC content: 49.33

Gene sequence:

>675_bases
ATGGGAACTATAGTTTATTTGTCGATACGCCTTGCCTGTGCCTGTTATATATTATATAAGGTATGTGGGCAGAAAAAGAA
GATACGTGAAATTTGCGACCTGCTGTATGCGAAGTTACCTCCCGTAAAACAGAAAGAGCCGGAAAACGTCTTGTCGGAAC
CGGGCGGCGAATCCGGCGTCATGGGCAGCACCCGTTTTGTCTATCTGGATGAGGATGCCGGAAAGAGCGTTGCCCCCTAT
ATGAGTCAGCCGTTGGAAACGGCTGCGGATTTTATAGGTGAGGAGGAAGATGTCGCTGAGGAAGAAGTGGAATGTAAATT
ACCGTTGGAGGAGATGAGAATGCTGAAAGAGGAACAGGAAGAACTGGACGGGACATACCCGGCAGTGGATGCCGTCTCAC
GGGCCGTAACGCCTGATGATCTTGACAATGCCGGCAATGTATTGTTTAAACTGAATGATGCGGACAAGGATGAGGGGAAA
TCCCTTCGTGCGGCTCTTACCCTGCACACCATCCGGGAAACGGACCTGTTTGAGATTTTTTCCTCCCAGGTCGAGAATAA
GAATGTCATCGACAGTCTGATGGGAAAATATCTGGACGGGAACGGGAACCCTCTGCCCGTGCGGAAAACAAAATCTGTCG
TACCTGTATCGGACGGTTGGAAACAATATCTGTGA

Upstream 100 bases:

>100_bases
TCCCCACATTTGTGAACAGTGTATTGTCGGACCATCTGAAAAGGTATCAGGATATAATTAACGGAATGTATAATCGGGAA
GCGACCCAAAAACCGGTGGA

Downstream 100 bases:

>100_bases
CCTTTCGGGTATACCAAAAGCGCATCCCGGAACAAATGCCGGGATGCGCTTTTATTTTTTCGTTTTCTTTACGGCTGTTT
TCTTCTATTCCTTATTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGTIVYLSIRLACACYILYKVCGQKKKIREICDLLYAKLPPVKQKEPENVLSEPGGESGVMGSTRFVYLDEDAGKSVAPY
MSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSRAVTPDDLDNAGNVLFKLNDADKDEGK
SLRAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLDGNGNPLPVRKTKSVVPVSDGWKQYL

Sequences:

>Translated_224_residues
MGTIVYLSIRLACACYILYKVCGQKKKIREICDLLYAKLPPVKQKEPENVLSEPGGESGVMGSTRFVYLDEDAGKSVAPY
MSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSRAVTPDDLDNAGNVLFKLNDADKDEGK
SLRAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLDGNGNPLPVRKTKSVVPVSDGWKQYL
>Mature_223_residues
GTIVYLSIRLACACYILYKVCGQKKKIREICDLLYAKLPPVKQKEPENVLSEPGGESGVMGSTRFVYLDEDAGKSVAPYM
SQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSRAVTPDDLDNAGNVLFKLNDADKDEGKS
LRAALTLHTIRETDLFEIFSSQVENKNVIDSLMGKYLDGNGNPLPVRKTKSVVPVSDGWKQYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24890; Mature: 24758

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTIVYLSIRLACACYILYKVCGQKKKIREICDLLYAKLPPVKQKEPENVLSEPGGESGV
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
MGSTRFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQE
CCCEEEEEEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
ELDGTYPAVDAVSRAVTPDDLDNAGNVLFKLNDADKDEGKSLRAALTLHTIRETDLFEIF
HHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SSQVENKNVIDSLMGKYLDGNGNPLPVRKTKSVVPVSDGWKQYL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
GTIVYLSIRLACACYILYKVCGQKKKIREICDLLYAKLPPVKQKEPENVLSEPGGESGV
CEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC
MGSTRFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQE
CCCEEEEEEECCCCCCCCHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
ELDGTYPAVDAVSRAVTPDDLDNAGNVLFKLNDADKDEGKSLRAALTLHTIRETDLFEIF
HHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SSQVENKNVIDSLMGKYLDGNGNPLPVRKTKSVVPVSDGWKQYL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA