Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29348014

Identifier: 29348014

GI number: 29348014

Start: 3246047

End: 3246754

Strand: Reverse

Name: 29348014

Synonym: BT_2604

Alternate gene names: NA

Gene position: 3246754-3246047 (Counterclockwise)

Preceding gene: 29348015

Following gene: 29348013

Centisome position: 51.86

GC content: 50.0

Gene sequence:

>708_bases
ATGAAATGTTTGTATCATGGTCTTTTGTCCCCTCCTATATTTGCGTTCGAATTCAAATTTATGTCTCACCTTAAACGATT
CTACAATGAGAAAGAGAATCCTTTTTTCAGTGCTTTTCGCGTTTTTTGCGGCCGGCTCTTTTGCGCAGGGGCAGGGGCTT
GCTGGCATCAACGAAGCCACGAGCATGCTGACCTCGTATTTCGATCCGGCAACCAAACTGTGCTATGCCATCGGCGCGGT
GCTTGGGCTGGTCGGGGGTATCAAGACCTACAGCAAGTTTTCAAGCGGCGATCCCGATACCAGCAAGACGGCAGCCAGCT
GGTTTTTCGCCTGTATATTTTTGATTGTGGCCGCCACTATCCTGCGTTCCTTCTTCCTCTAGAGGCTATGGAATATGAGA
TAAACAAAGGCGCGGGTAATCCTTTGGAGTTCAAGGGCCTGAAATCACAGTACCTTTTTATTTTTGCGGGCGGGCTTGTC
GCGGTGCTGCTTGTGGTGGTCATCCTTTATATAGCCGGTGTGAACCAGTGGATATGCATTCCTTTCGGGCTCCTGTCCGG
TTCGCTGCTGGTCTGGCTGACCTTCCGCCTGAATGCCCGGTATGGTGAACACGGCCTTATGAAGCTGCTGTCGGGGAAAC
GCCATCCTCGTTATCTGATCCACCGCAGGAGATTATTCCGATTACTGACCAAAAGAAGAAAGAAATGA

Upstream 100 bases:

>100_bases
TTTTCTGGCAGATATTAACAGACTTGTTTCTCTTTCAACCGGGCTGAAAGACGTCTGAGCTTTGTAAGATATGACATCTG
CTGACATTTGCTGCCACCTG

Downstream 100 bases:

>100_bases
GAAATGTATTGAAAGCTGAAACGCTTGAACGTAAGTTCCCCCTGCTGTCTGTGGAGAACGGCTGCATTGTCAGCAAGGAT
GCCGACCTGACCGTGGCCTT

Product: conjugate transposon protein

Products: NA

Alternate protein names: Conjugate Transposon Protein; Conjugal Transfer Protein TraF; Transmembrane Conjugate Transposon Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKCLYHGLLSPPIFAFEFKFMSHLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRSGNQTVLCHRRG
AWAGRGYQDLQQVFKRRSRYQQDGSQLVFRLYIFDCGRHYPAFLLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLV
AVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRKK

Sequences:

>Translated_235_residues
MKCLYHGLLSPPIFAFEFKFMSHLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRSGNQTVLCHRRG
AWAGRGYQDLQQVFKRRSRYQQDGSQLVFRLYIFDCGRHYPAFLLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLV
AVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRKK
>Mature_235_residues
MKCLYHGLLSPPIFAFEFKFMSHLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRSGNQTVLCHRRG
AWAGRGYQDLQQVFKRRSRYQQDGSQLVFRLYIFDCGRHYPAFLLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLV
AVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27473; Mature: 27473

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCLYHGLLSPPIFAFEFKFMSHLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSH
CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
EHADLVFRSGNQTVLCHRRGAWAGRGYQDLQQVFKRRSRYQQDGSQLVFRLYIFDCGRHY
CCHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PAFLLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLVAVLLVVVILYIAGVNQWICI
CHHEEEHHHHHHHHCCCCCCCCEECCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE
PFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRKK
EHHHHHCCEEEEEEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCLYHGLLSPPIFAFEFKFMSHLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSH
CCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
EHADLVFRSGNQTVLCHRRGAWAGRGYQDLQQVFKRRSRYQQDGSQLVFRLYIFDCGRHY
CCHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
PAFLLPLEAMEYEINKGAGNPLEFKGLKSQYLFIFAGGLVAVLLVVVILYIAGVNQWICI
CHHEEEHHHHHHHHCCCCCCCCEECCCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE
PFGLLSGSLLVWLTFRLNARYGEHGLMKLLSGKRHPRYLIHRRRLFRLLTKRRKK
EHHHHHCCEEEEEEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA