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The map label for this gene is traC [H]

Identifier: 29348013

GI number: 29348013

Start: 3243651

End: 3246050

Strand: Reverse

Name: traC [H]

Synonym: BT_2603

Alternate gene names: 29348013

Gene position: 3246050-3243651 (Counterclockwise)

Preceding gene: 29348014

Following gene: 29348012

Centisome position: 51.85

GC content: 53.17

Gene sequence:

>2400_bases
ATGAGAAATGTATTGAAAGCTGAAACGCTTGAACGTAAGTTCCCCCTGCTGTCTGTGGAGAACGGCTGCATTGTCAGCAA
GGATGCCGACCTGACCGTGGCCTTTGAGGTGGAACTTCCCGAACTGTTTACTATGACTGCAGCCGAATACGAGGCTGTCC
ACTCTTCCTGGGTAAAGGCTGTCAAAGTGCTGCCGGATTTTTCGGTTGTCTGCAAGCAGGACTGGTTCACGAAGGAAACC
TACCGTCCTGATTTCCGGGACGGTGAACAGAGCTTCCTGTCGAAAAGCTATGAGCGCCATTTCAACGAGCGCCCGTACCT
GAACCACAAATGCTACCTGTATCTGACGAAGACCACGCGTGAGCGCAGCCGGCAGAGGAGTGACTTTAACAGCCTCTGTT
GCGGTTCCCTTCTGCCCAAGGAAATGGTTGACAAGGACACGGCGGTCCGCTTTCTGGAAGCAGTGGAACAGTTCGAGCGT
ATCATGAACGATTCCGGTCATGTCAGCCTGCGCAGGCTGGAGGCGGATGAGATTACCGGCACTGAGGGACGTCCCGGACT
GGTGGAGAAATATTTCTCCCTGTCGCTGGAGGATGAAACCGCCGTGCTTCAGGACATCTGTCTTAACCCCGGCGGCATGC
GTGTGGGTGACAAGCGGCTGTGTGTGCATACCCTATCTGATACGGAGGACCTTCCCGTCAGAGTGTCCACCGATATGCGT
TATGGACGTATGTCCACCGACCGCAGTGACTGCCGCCTCTCGTTCGCCGCTCCCGTCGGCCTGTTGCTTCCCTGTAACCA
TATCTATTCGCAGTATGTGTTTATAGACGATGCGCAGGAGATTCTCCGTACGATGGAAAAAACTTCCCGCAACATGCTCT
CCCTCTCGAAGTACAGCCGGAGCAATGCGGTAAACCGGGAGTGGACGGAGATGTATCTGGATGAAGCCCATACGAAGGGC
GTATTGCCCGTCCGCTGCCACTGCAACGTGATGGCGTGGGCAGAAGACAGGGAGGAACTCAGACGTGTGAAGAATGATAC
CGGCAGCCAGCTTGCCATGATGGAATGTACGCCGAGGCACAATACGGTGGATGCCCCGGTGCTCTACTGGGCTGGCATTC
CCGGCAATGCGGGCGATTTTCCGGCAGAGGAGTCGTTCTACACCTTTCTGGAACAGGCCGTCTGTCTCTTTACGGCTGAA
ACCAATTACCGGAGTTCTTCCAGCCCGTTCGGCATCCGTATGGCTGACCGCCGGAACGGCATCCCCCTGCATGTTGACAT
CAGCGACCTGCCGATGAAACGAGGTATCATCACGAACCGCAACAAGTTTGTTCTCGGTCCCAGCGGTAGCGGCAAATCCT
TTTTTACCAACCACCTGGTCAGACAATATTATGAACAGGGCACGCATATCCTGCTGGTGGATACGGGCAACAGCTACCAG
GGACTGTGCCGTATGATCCATGACCGTACGCACGGTGAGGACGGTATCTATATAACGTATGAGGAGGATAATCCGATAGC
TTTTAATCCTTTTTATACGGATTCCGGACAGTTTGACGTTGAAAAACGTGAGAGTATCAAGACGCTGATCCTGACTTTGT
GGAAACGGGAGGACGAAGCCCCGAAACGTTCGGAGGAGGTGGCCCTGTCGGGTGCGGTGAATGCCTATATCCGCCGGATT
ACGGATGACAGGGCGTCCAGGCCGGATTTTAACGGCTTCTATGAGTTTGTCCGTGATGACTACCGCCGTATGATCGAGCA
AAAGAAGGTGCGTGAAAAGGACTTCGATATTGACGGCTTTCTGAATGTGCTGGAACCGTTTTACAGGGGCGGGGACTATG
ACTTCCTGCTGAACTCCGACAAGGAACTGGACCTGACGAACAAACGGTTCATAGTCTTTGAACTGGACAACATCTCCTCC
AACAAGGTCCTGCTTCCGGTGGTTACGCTTATTATCATGGAAACCTTTATTTCCAAGATGAGAAAGCTCAGGGGAATCCG
CAAGATGATATTGATTGAGGAATGTTGGAAAGCCCTGATGTCCGCCAACATGAGTGAATACATCAAGTATCTCTTTAAAA
CCGTCAGAAAGTATTTCGGTGAGGCCGTGGTAGTGACGCAGGAGGTGGACGACATCATCTCCTCGGATATTGTCAAGGAG
GCGATCATCAACAACTCGGACTGCAAGATACTGCTTGACCAGCGTAAATATATGAACAAGTTCGAACATATCCAGAAACT
TCTGGGACTGACGGAGAAGGAGAGGGGTCAGATCCTTTCCATCAACCGTGCGAACCGTCCCGGACCTTTCTACCGTGAAG
TCTGGATCGGGCTGGGCGGAACACACTCCGCCGTTTATGCGACGGAGGTCAGCGCGGAGGAGTATGCGGTGCGCCCGTAA

Upstream 100 bases:

>100_bases
GTGAACACGGCCTTATGAAGCTGCTGTCGGGGAAACGCCATCCTCGTTATCTGATCCACCGCAGGAGATTATTCCGATTA
CTGACCAAAAGAAGAAAGAA

Downstream 100 bases:

>100_bases
AGGGAATTTGACGAATGTCGCTTTGGCAAGCGACTGGGCAAGTGTTTAAAATGCCCATTAACAACCGCTAACCGGAGGGG
AAAACCCCACAAGGGAACAT

Product: conjugate transposon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 799; Mature: 799

Protein sequence:

>799_residues
MRNVLKAETLERKFPLLSVENGCIVSKDADLTVAFEVELPELFTMTAAEYEAVHSSWVKAVKVLPDFSVVCKQDWFTKET
YRPDFRDGEQSFLSKSYERHFNERPYLNHKCYLYLTKTTRERSRQRSDFNSLCCGSLLPKEMVDKDTAVRFLEAVEQFER
IMNDSGHVSLRRLEADEITGTEGRPGLVEKYFSLSLEDETAVLQDICLNPGGMRVGDKRLCVHTLSDTEDLPVRVSTDMR
YGRMSTDRSDCRLSFAAPVGLLLPCNHIYSQYVFIDDAQEILRTMEKTSRNMLSLSKYSRSNAVNREWTEMYLDEAHTKG
VLPVRCHCNVMAWAEDREELRRVKNDTGSQLAMMECTPRHNTVDAPVLYWAGIPGNAGDFPAEESFYTFLEQAVCLFTAE
TNYRSSSSPFGIRMADRRNGIPLHVDISDLPMKRGIITNRNKFVLGPSGSGKSFFTNHLVRQYYEQGTHILLVDTGNSYQ
GLCRMIHDRTHGEDGIYITYEEDNPIAFNPFYTDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEVALSGAVNAYIRRI
TDDRASRPDFNGFYEFVRDDYRRMIEQKKVREKDFDIDGFLNVLEPFYRGGDYDFLLNSDKELDLTNKRFIVFELDNISS
NKVLLPVVTLIIMETFISKMRKLRGIRKMILIEECWKALMSANMSEYIKYLFKTVRKYFGEAVVVTQEVDDIISSDIVKE
AIINNSDCKILLDQRKYMNKFEHIQKLLGLTEKERGQILSINRANRPGPFYREVWIGLGGTHSAVYATEVSAEEYAVRP

Sequences:

>Translated_799_residues
MRNVLKAETLERKFPLLSVENGCIVSKDADLTVAFEVELPELFTMTAAEYEAVHSSWVKAVKVLPDFSVVCKQDWFTKET
YRPDFRDGEQSFLSKSYERHFNERPYLNHKCYLYLTKTTRERSRQRSDFNSLCCGSLLPKEMVDKDTAVRFLEAVEQFER
IMNDSGHVSLRRLEADEITGTEGRPGLVEKYFSLSLEDETAVLQDICLNPGGMRVGDKRLCVHTLSDTEDLPVRVSTDMR
YGRMSTDRSDCRLSFAAPVGLLLPCNHIYSQYVFIDDAQEILRTMEKTSRNMLSLSKYSRSNAVNREWTEMYLDEAHTKG
VLPVRCHCNVMAWAEDREELRRVKNDTGSQLAMMECTPRHNTVDAPVLYWAGIPGNAGDFPAEESFYTFLEQAVCLFTAE
TNYRSSSSPFGIRMADRRNGIPLHVDISDLPMKRGIITNRNKFVLGPSGSGKSFFTNHLVRQYYEQGTHILLVDTGNSYQ
GLCRMIHDRTHGEDGIYITYEEDNPIAFNPFYTDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEVALSGAVNAYIRRI
TDDRASRPDFNGFYEFVRDDYRRMIEQKKVREKDFDIDGFLNVLEPFYRGGDYDFLLNSDKELDLTNKRFIVFELDNISS
NKVLLPVVTLIIMETFISKMRKLRGIRKMILIEECWKALMSANMSEYIKYLFKTVRKYFGEAVVVTQEVDDIISSDIVKE
AIINNSDCKILLDQRKYMNKFEHIQKLLGLTEKERGQILSINRANRPGPFYREVWIGLGGTHSAVYATEVSAEEYAVRP
>Mature_799_residues
MRNVLKAETLERKFPLLSVENGCIVSKDADLTVAFEVELPELFTMTAAEYEAVHSSWVKAVKVLPDFSVVCKQDWFTKET
YRPDFRDGEQSFLSKSYERHFNERPYLNHKCYLYLTKTTRERSRQRSDFNSLCCGSLLPKEMVDKDTAVRFLEAVEQFER
IMNDSGHVSLRRLEADEITGTEGRPGLVEKYFSLSLEDETAVLQDICLNPGGMRVGDKRLCVHTLSDTEDLPVRVSTDMR
YGRMSTDRSDCRLSFAAPVGLLLPCNHIYSQYVFIDDAQEILRTMEKTSRNMLSLSKYSRSNAVNREWTEMYLDEAHTKG
VLPVRCHCNVMAWAEDREELRRVKNDTGSQLAMMECTPRHNTVDAPVLYWAGIPGNAGDFPAEESFYTFLEQAVCLFTAE
TNYRSSSSPFGIRMADRRNGIPLHVDISDLPMKRGIITNRNKFVLGPSGSGKSFFTNHLVRQYYEQGTHILLVDTGNSYQ
GLCRMIHDRTHGEDGIYITYEEDNPIAFNPFYTDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEVALSGAVNAYIRRI
TDDRASRPDFNGFYEFVRDDYRRMIEQKKVREKDFDIDGFLNVLEPFYRGGDYDFLLNSDKELDLTNKRFIVFELDNISS
NKVLLPVVTLIIMETFISKMRKLRGIRKMILIEECWKALMSANMSEYIKYLFKTVRKYFGEAVVVTQEVDDIISSDIVKE
AIINNSDCKILLDQRKYMNKFEHIQKLLGLTEKERGQILSINRANRPGPFYREVWIGLGGTHSAVYATEVSAEEYAVRP

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 92186; Mature: 92186

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVLKAETLERKFPLLSVENGCIVSKDADLTVAFEVELPELFTMTAAEYEAVHSSWVKA
CCCCHHHHHHHHHCCEEEECCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VKVLPDFSVVCKQDWFTKETYRPDFRDGEQSFLSKSYERHFNERPYLNHKCYLYLTKTTR
HHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHH
ERSRQRSDFNSLCCGSLLPKEMVDKDTAVRFLEAVEQFERIMNDSGHVSLRRLEADEITG
HHHHHHCCHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCC
TEGRPGLVEKYFSLSLEDETAVLQDICLNPGGMRVGDKRLCVHTLSDTEDLPVRVSTDMR
CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCC
YGRMSTDRSDCRLSFAAPVGLLLPCNHIYSQYVFIDDAQEILRTMEKTSRNMLSLSKYSR
CCCCCCCCCCCEEEECCCCCCEEECHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SNAVNREWTEMYLDEAHTKGVLPVRCHCNVMAWAEDREELRRVKNDTGSQLAMMECTPRH
CCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHHHHHCCCCCEEEEEEECCCC
NTVDAPVLYWAGIPGNAGDFPAEESFYTFLEQAVCLFTAETNYRSSSSPFGIRMADRRNG
CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCC
IPLHVDISDLPMKRGIITNRNKFVLGPSGSGKSFFTNHLVRQYYEQGTHILLVDTGNSYQ
CEEEEEHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHH
GLCRMIHDRTHGEDGIYITYEEDNPIAFNPFYTDSGQFDVEKRESIKTLILTLWKREDEA
HHHHHHHHCCCCCCCEEEEEECCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
PKRSEEVALSGAVNAYIRRITDDRASRPDFNGFYEFVRDDYRRMIEQKKVREKDFDIDGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LNVLEPFYRGGDYDFLLNSDKELDLTNKRFIVFELDNISSNKVLLPVVTLIIMETFISKM
HHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RKLRGIRKMILIEECWKALMSANMSEYIKYLFKTVRKYFGEAVVVTQEVDDIISSDIVKE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
AIINNSDCKILLDQRKYMNKFEHIQKLLGLTEKERGQILSINRANRPGPFYREVWIGLGG
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHEEECCC
THSAVYATEVSAEEYAVRP
CCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRNVLKAETLERKFPLLSVENGCIVSKDADLTVAFEVELPELFTMTAAEYEAVHSSWVKA
CCCCHHHHHHHHHCCEEEECCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VKVLPDFSVVCKQDWFTKETYRPDFRDGEQSFLSKSYERHFNERPYLNHKCYLYLTKTTR
HHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHH
ERSRQRSDFNSLCCGSLLPKEMVDKDTAVRFLEAVEQFERIMNDSGHVSLRRLEADEITG
HHHHHHCCHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCC
TEGRPGLVEKYFSLSLEDETAVLQDICLNPGGMRVGDKRLCVHTLSDTEDLPVRVSTDMR
CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCC
YGRMSTDRSDCRLSFAAPVGLLLPCNHIYSQYVFIDDAQEILRTMEKTSRNMLSLSKYSR
CCCCCCCCCCCEEEECCCCCCEEECHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
SNAVNREWTEMYLDEAHTKGVLPVRCHCNVMAWAEDREELRRVKNDTGSQLAMMECTPRH
CCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHHHHHCCCCCEEEEEEECCCC
NTVDAPVLYWAGIPGNAGDFPAEESFYTFLEQAVCLFTAETNYRSSSSPFGIRMADRRNG
CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCC
IPLHVDISDLPMKRGIITNRNKFVLGPSGSGKSFFTNHLVRQYYEQGTHILLVDTGNSYQ
CEEEEEHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHH
GLCRMIHDRTHGEDGIYITYEEDNPIAFNPFYTDSGQFDVEKRESIKTLILTLWKREDEA
HHHHHHHHCCCCCCCEEEEEECCCCEEECCEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
PKRSEEVALSGAVNAYIRRITDDRASRPDFNGFYEFVRDDYRRMIEQKKVREKDFDIDGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LNVLEPFYRGGDYDFLLNSDKELDLTNKRFIVFELDNISSNKVLLPVVTLIIMETFISKM
HHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RKLRGIRKMILIEECWKALMSANMSEYIKYLFKTVRKYFGEAVVVTQEVDDIISSDIVKE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
AIINNSDCKILLDQRKYMNKFEHIQKLLGLTEKERGQILSINRANRPGPFYREVWIGLGG
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHEEECCC
THSAVYATEVSAEEYAVRP
CCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]