| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348009
Identifier: 29348009
GI number: 29348009
Start: 3238992
End: 3240005
Strand: Reverse
Name: 29348009
Synonym: BT_2599
Alternate gene names: NA
Gene position: 3240005-3238992 (Counterclockwise)
Preceding gene: 29348010
Following gene: 29348008
Centisome position: 51.75
GC content: 54.73
Gene sequence:
>1014_bases ATGGTGTTGTTGTCGATAGATTTTGCCAGCCTCCATACGATACTGGAGAGTCTGTACAATGAGATGATGCCTCTTTGCGA GGACATGCTGGGTGTGGCGAAGGGCGTTGCGGGACTGGGTGCCCTGTTTTATGTCGCCCTCCGTGTCTGGCAGTCAATGG CCCGTGCCGAGCCGGTGGACGTCTATCCGCTGCTTCGCCCTTTTGCGCTGGGTATCTGTATCCTGCTGTTTCCGACACTG GTGCTGGGAACGATGAACAGTATTCTAAGTCCCATTGTGCAGGGGACCCACAGGATGCTGGAAGGGCAGACACTGGACAT GCAGCAGTACAGGGCGCAGAAAGACCGGCTGGAGAGGGAGGCCATGATGCGCAATCCCGAAACCGCCTATCTGGTCAGCG ACGAGGAGTTTGACCGCCAGCTGGATGAGCTCGGCTGGTCTCCGGGAGATGCTGCCACCCGTCTGGGAATGTATATGGAA GTGGGCATGTATAATCTGGAGAAGAGTATCCGTGATGCTTTCCGCAGCCTGCTGGAATTGCTCTTTGCAGCCGCTTCGTT GCTGATAGATACGGTACGGACCTTTTTCCTGGTGGTACTTTCCGTGCTGGGTCCGATAGCCTTCTCCATTTCGGTGTGGG ACGGCTTGCAGTCCACGCTCGGGCAGTGGTTCACAAGATATATATCGGTCTACCTGTGGCTTCCTGTCAGCGACTTGTTC AGTTGCATGCTTGCCAAGATACAGGTGCTCATGCTTCAGAACGATATTGCCGAACTGCAGGGAAATCCCGATTATTCACT GGACAATTCGAACTGCGTGTACATCATTTTCATGTTGATCGGGATTGTCGGTTATTTTACCGTTCCGACCGTTTCCGGCT GGATTGTCCAGGCGGGAGGTGGCGGCAACTATTCCCGCAATCTGAACCGTACGGCGACTAAAGCCGGTGGTTTCACTGCC GGTGCCGGCGGTGCGGCACTGGGTAATATCGGAGGGCGTATACGTGGAAAATAA
Upstream 100 bases:
>100_bases CAGGAATATCGCCGTGAGCTACCTGCGTGCCAGGAAGAGGAACGACATGGACCGCGTAATGAGGCTCTATGGTGATGAAA CCTCCAGATACTGGTAGCCT
Downstream 100 bases:
>100_bases ACAATCAAAAACGATTCACAGATGGAATTCAAGTCATTGACCAATATTGAAAGCAGCTTCAGGCGTATCCGCCTGATGCT GGCAGCCTTTGTATGCTGCT
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVDVYPLLRPFALGICILLFPTL VLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLEREAMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYME VGMYNLEKSIRDAFRSLLELLFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGGGGNYSRNLNRTATKAGGFTA GAGGAALGNIGGRIRGK
Sequences:
>Translated_337_residues MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVDVYPLLRPFALGICILLFPTL VLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLEREAMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYME VGMYNLEKSIRDAFRSLLELLFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGGGGNYSRNLNRTATKAGGFTA GAGGAALGNIGGRIRGK >Mature_337_residues MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVDVYPLLRPFALGICILLFPTL VLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLEREAMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYME VGMYNLEKSIRDAFRSLLELLFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGGGGNYSRNLNRTATKAGGFTA GAGGAALGNIGGRIRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37162; Mature: 37162
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVD CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VYPLLRPFALGICILLFPTLVLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYMEVGMYNLEKSIRDAFRSLLEL HHHCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCC GGNYSRNLNRTATKAGGFTAGAGGAALGNIGGRIRGK CCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MVLLSIDFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVD CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VYPLLRPFALGICILLFPTLVLGTMNSILSPIVQGTHRMLEGQTLDMQQYRAQKDRLERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AMMRNPETAYLVSDEEFDRQLDELGWSPGDAATRLGMYMEVGMYNLEKSIRDAFRSLLEL HHHCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLPVSDLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SCMLAKIQVLMLQNDIAELQGNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCC GGNYSRNLNRTATKAGGFTAGAGGAALGNIGGRIRGK CCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA