| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348010
Identifier: 29348010
GI number: 29348010
Start: 3240009
End: 3240653
Strand: Reverse
Name: 29348010
Synonym: BT_2600
Alternate gene names: NA
Gene position: 3240653-3240009 (Counterclockwise)
Preceding gene: 29348011
Following gene: 29348009
Centisome position: 51.76
GC content: 51.63
Gene sequence:
>645_bases ATGAGAACGGGAGGCATATGGAAAAAGGCAAGCCTTGTTTGTACGGTGTTTCTGCTGGCAACCGTACAGTCAAGCGCTCA GTGGGTGGTTACCGATCCCGGAAACCTTGCCCAGGGTATCATCAACATGTCGGACAATATTGCGCATACCTCCAAGACGG CCACGAACACCGCGCAGAGCTTTTCCGAAACGGTCAAGATCTATGAGCAGTCAAAAAAATACTATGACGCCCTTAAATCC GTGAACAACCTGGTGAGGGACGCCCGCAAGGTGCGTGAAATCATCCTGATGGTGGGTGACCTATCGGATATCTATGTCAC CGGCTTCGGCAGGATGATGAAGGATGAGAATTTTTCGGCAAGGGAACTGGACGCCATCGCTTCCGGTTATACGAAACTTC TGGAGGAGAGCAACGGCGTATTGCAGGATCTGAAGCAGGTAATCGATGTCAGCACCCTCTCCATGACGGACAAGGACCGC ATGGACGTGGTGGATGAGTGTTACCGTGACATGCGTCGTTACCGGAACCTTGTCAGTTATTATACGAACAGGAATATCGC CGTGAGCTACCTGCGTGCCAGGAAGAGGAACGACATGGACCGCGTAATGAGGCTCTATGGTGATGAAACCTCCAGATACT GGTAG
Upstream 100 bases:
>100_bases TCATCAACACTGGATACCGTATTGACGTGTCCTATAATGAAGCGACCGACGTGCTGACTTTTTCCCCCCACGGTGATTAT GTACGTAATGAAAACAGACG
Downstream 100 bases:
>100_bases CCTATGGTGTTGTTGTCGATAGATTTTGCCAGCCTCCATACGATACTGGAGAGTCTGTACAATGAGATGATGCCTCTTTG CGAGGACATGCTGGGTGTGG
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; TraI Protein; Conserved Protein Found In Conjugate Transposon TraI; Transfer Complex Protein TraI
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRTGGIWKKASLVCTVFLLATVQSSAQWVVTDPGNLAQGIINMSDNIAHTSKTATNTAQSFSETVKIYEQSKKYYDALKS VNNLVRDARKVREIILMVGDLSDIYVTGFGRMMKDENFSARELDAIASGYTKLLEESNGVLQDLKQVIDVSTLSMTDKDR MDVVDECYRDMRRYRNLVSYYTNRNIAVSYLRARKRNDMDRVMRLYGDETSRYW
Sequences:
>Translated_214_residues MRTGGIWKKASLVCTVFLLATVQSSAQWVVTDPGNLAQGIINMSDNIAHTSKTATNTAQSFSETVKIYEQSKKYYDALKS VNNLVRDARKVREIILMVGDLSDIYVTGFGRMMKDENFSARELDAIASGYTKLLEESNGVLQDLKQVIDVSTLSMTDKDR MDVVDECYRDMRRYRNLVSYYTNRNIAVSYLRARKRNDMDRVMRLYGDETSRYW >Mature_214_residues MRTGGIWKKASLVCTVFLLATVQSSAQWVVTDPGNLAQGIINMSDNIAHTSKTATNTAQSFSETVKIYEQSKKYYDALKS VNNLVRDARKVREIILMVGDLSDIYVTGFGRMMKDENFSARELDAIASGYTKLLEESNGVLQDLKQVIDVSTLSMTDKDR MDVVDECYRDMRRYRNLVSYYTNRNIAVSYLRARKRNDMDRVMRLYGDETSRYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24555; Mature: 24555
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGGIWKKASLVCTVFLLATVQSSAQWVVTDPGNLAQGIINMSDNIAHTSKTATNTAQS CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHH FSETVKIYEQSKKYYDALKSVNNLVRDARKVREIILMVGDLSDIYVTGFGRMMKDENFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH RELDAIASGYTKLLEESNGVLQDLKQVIDVSTLSMTDKDRMDVVDECYRDMRRYRNLVSY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH YTNRNIAVSYLRARKRNDMDRVMRLYGDETSRYW HHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MRTGGIWKKASLVCTVFLLATVQSSAQWVVTDPGNLAQGIINMSDNIAHTSKTATNTAQS CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHH FSETVKIYEQSKKYYDALKSVNNLVRDARKVREIILMVGDLSDIYVTGFGRMMKDENFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH RELDAIASGYTKLLEESNGVLQDLKQVIDVSTLSMTDKDRMDVVDECYRDMRRYRNLVSY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH YTNRNIAVSYLRARKRNDMDRVMRLYGDETSRYW HHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA