| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348005
Identifier: 29348005
GI number: 29348005
Start: 3235825
End: 3236754
Strand: Reverse
Name: 29348005
Synonym: BT_2595
Alternate gene names: NA
Gene position: 3236754-3235825 (Counterclockwise)
Preceding gene: 29348006
Following gene: 29348004
Centisome position: 51.7
GC content: 49.46
Gene sequence:
>930_bases ATGCAATCGGATATGAAAAAGATTCTGATGATGTTTTTTGCCCTGATGACGGGGGTGACGGCTGCCAGTGCGCAGTTGAG TAGCGGGGATTTTTTTGAGGGACTGAGCCGCAAGATCGGCTTTAGCAGGATGATAGCCCCGCACGGGCTGGAAATCACTT ATGATAAAACGGTACATGTCATATTTCCTTCCCCGATCAAGTATGTGGACCTGGGGTCCACCAATCTGATAGCCGGAAAG GCGGATGCGGCGGAGAACGTGATCCGTGTGAAAGCTGCTAAAAAGCATTTCCGGGATGAGACGAACATGAGCGTGATCAC TGAAGATGGAAATTTTTACACGTTCAATGTCAGGTATGCGGATGAACCGCTCCTGTTGAACGTGGAGATGTGCGATTTCA TTCATGACGGTGAAACGGTGAACCGTCCGAACAATGCCATGGAAATCTATTTGCAGGAACTGGGCAATGAGTCCCCGCGT CTGGTACGCCTGATTATGAAGTCCGTGCACAGGCAGGACAAAAGACGGGTCAGACATATCGGCTGTAAACGTTTCGGGGT CCAGTTCCTACTTAGGGGGCTTTATACCCATAATGACCTGCTGTACTTTCATACACAGCTAAGGAATGAGACGAATGTCC CGTTTGATGTGGATTTCGTGACCTTCAAGATTGTCGACAAAAAGATCGTGAAACGTACCGCCATGCAGGAACAGGTGATC TATCCTTTGCGTGCCTGCAACTATGTGACCCGTGTGGATGGAAAGGCCTCGGAACGTACGGTGTTCGCGTTACCCAAATT TACGATACCGGAGGACAAGAAACTGGTGGTGGAGATGTATGAGAAACAGGGAGGACGCCACCAGATGTTTGAGGTGGATA ATGAGTCCCTTGTGCGTGCTGAACCCGTCAACGAATTGAAGGTACGATGA
Upstream 100 bases:
>100_bases AGGTCACTCTGAAAGCAGGACACAGGCTGTTGCTTCATTCTCCCGAACAGTGAGACACAAAAGCAGTAAAAGAAAATCAA TCATTAACTAACCAATCAAG
Downstream 100 bases:
>100_bases GAATGACCGGAAAATTTGTGTTGCTGCTTGCGGCTATGCTTGCCCTGTTTCTGGGGCAGGCGCAGGCCCAACGCTGCCTG CCGGGTATGAAAGGTGTGCA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR
Sequences:
>Translated_309_residues MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR >Mature_309_residues MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHVIFPSPIKYVDLGSTNLIAGK ADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYADEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPR LVRLIMKSVHRQDKRRVRHIGCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRAEPVNELKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35581; Mature: 35581
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHV CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEECCEEEE IFPSPIKYVDLGSTNLIAGKADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYA ECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEC DEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPRLVRLIMKSVHRQDKRRVRHI CCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRA HHHHHCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE EPVNELKVR CCCHHCCCC >Mature Secondary Structure MQSDMKKILMMFFALMTGVTAASAQLSSGDFFEGLSRKIGFSRMIAPHGLEITYDKTVHV CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCCEEEECCEEEE IFPSPIKYVDLGSTNLIAGKADAAENVIRVKAAKKHFRDETNMSVITEDGNFYTFNVRYA ECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEEEC DEPLLLNVEMCDFIHDGETVNRPNNAMEIYLQELGNESPRLVRLIMKSVHRQDKRRVRHI CCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GCKRFGVQFLLRGLYTHNDLLYFHTQLRNETNVPFDVDFVTFKIVDKKIVKRTAMQEQVI HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH YPLRACNYVTRVDGKASERTVFALPKFTIPEDKKLVVEMYEKQGGRHQMFEVDNESLVRA HHHHHCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE EPVNELKVR CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA