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The map label for this gene is 29347972

Identifier: 29347972

GI number: 29347972

Start: 3199007

End: 3199432

Strand: Reverse

Name: 29347972

Synonym: BT_2562

Alternate gene names: NA

Gene position: 3199432-3199007 (Counterclockwise)

Preceding gene: 29347973

Following gene: 29347971

Centisome position: 51.11

GC content: 44.13

Gene sequence:

>426_bases
ATGATTACTCTGTGGGAAAACAGGGATAAGTGGGAAGAAGATTCCAATCTGCACGGTCTGCTGCTGACTATCATCAAAAA
CAAAGCGCTCAACTATCTGGCACATCTGCAGGTGCGTCTTCGGGCCGAAGAAGAGATAAATAGCCATAGCCAGCGGGAAC
TGGACCTGAGAATCTCTACACTGGAAGCCTGCGAACCGGATGCGATCTTTGATTCGGAAATACAGCATATCGTACAGAAA
GCATTGAAACGTATGCCGAACCAAAGCCGGCAGATTTTTATATTGAGCCGTTATCAAAATACTCCGAACAAAAAGATAGC
GGAACAACTCGGCATTTCCGTCAAAAGTGTGGAGTTCCACATCACCAAAGCATTGAAAATTCTGCGTACCGAACTGAAAG
ATTACCTGGTTTCTATTCTTTTTTAA

Upstream 100 bases:

>100_bases
TTTTTCTGAATTCTTTCATGAGAATCAAGAGAAGTTTTTGTCGTTTGCCTATTCTTATATAAGAGACAGGCAGGAGGCGG
AAGATATATTGATGGAGTCA

Downstream 100 bases:

>100_bases
AAATAATCGCATTTTTCGTTAGGGTTGTTCAAGGCTGACCTGTTTTATATATAGAAGGGAGAGAAAAAGCCTTTCTATAA
ATATAAATAGGAAAAGCCAA

Product: putative RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor; ECF-Type RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MITLWENRDKWEEDSNLHGLLLTIIKNKALNYLAHLQVRLRAEEEINSHSQRELDLRISTLEACEPDAIFDSEIQHIVQK
ALKRMPNQSRQIFILSRYQNTPNKKIAEQLGISVKSVEFHITKALKILRTELKDYLVSILF

Sequences:

>Translated_141_residues
MITLWENRDKWEEDSNLHGLLLTIIKNKALNYLAHLQVRLRAEEEINSHSQRELDLRISTLEACEPDAIFDSEIQHIVQK
ALKRMPNQSRQIFILSRYQNTPNKKIAEQLGISVKSVEFHITKALKILRTELKDYLVSILF
>Mature_141_residues
MITLWENRDKWEEDSNLHGLLLTIIKNKALNYLAHLQVRLRAEEEINSHSQRELDLRISTLEACEPDAIFDSEIQHIVQK
ALKRMPNQSRQIFILSRYQNTPNKKIAEQLGISVKSVEFHITKALKILRTELKDYLVSILF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16550; Mature: 16550

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLWENRDKWEEDSNLHGLLLTIIKNKALNYLAHLQVRLRAEEEINSHSQRELDLRIST
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LEACEPDAIFDSEIQHIVQKALKRMPNQSRQIFILSRYQNTPNKKIAEQLGISVKSVEFH
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH
ITKALKILRTELKDYLVSILF
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITLWENRDKWEEDSNLHGLLLTIIKNKALNYLAHLQVRLRAEEEINSHSQRELDLRIST
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LEACEPDAIFDSEIQHIVQKALKRMPNQSRQIFILSRYQNTPNKKIAEQLGISVKSVEFH
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH
ITKALKILRTELKDYLVSILF
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA