| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347912
Identifier: 29347912
GI number: 29347912
Start: 3126511
End: 3127710
Strand: Reverse
Name: 29347912
Synonym: BT_2502
Alternate gene names: NA
Gene position: 3127710-3126511 (Counterclockwise)
Preceding gene: 29347913
Following gene: 29347910
Centisome position: 49.96
GC content: 47.0
Gene sequence:
>1200_bases ATGAAAAGAATTCTATTTATATTGTTAGTCGTGACTGCCAGTACCACTGTAATGGCGGGAATGAGTACCAGCAAGGTACG TAAGGAGACACGTTTCCTTACTGATAAGATGGCATACGAACTGGACCTGAATAATCCCCAATATAATGACGTGTATGAGA TTAACTATGATTTCATTTATTCGCTTCGTAATATTATGGATTATGTAGTACGGGGTGATGAGTGGGCATTGGATGATTAC TATGAAGCGCTGGATATTCGCAACGATGATCTTCGTTGGGTGTTGAGCGATGTGCAATACCGCAGATTCTTGGGAGCTGA GTATTTCTATCGTCCGATTTATGTCACCGGGGGAAGATGGAATTTCCGGATTTATATCAATTATCCGAATCGTAGTTTAT TCTATTTTGGTGTACCTTATCATTATCGGACTTACTGTGGTGCACATTATCGTCCGCATATTCATCATGTGAGTTATTAT CGGGGAAGATATAATAATCTTGTGCACTATCCTACGCCATATCGGGTAAGAGATCAGCGGGTATTCCATTCTTATCGTCG TTCAGACTTCGGTTCTGTACGTTTCCGTCCGAACACTTCTGTTCGTCCGCATAATGCACCTACCCGACCGGGGACTTCGG GACGTCCGGGAACAACGTCACGGCCTAATACATCGGGACGTCCGGGAAATACTTCCCGTCCTCGTCCTGAAACGGACCAT AGACCGTCCACTTCAGGCAGACCATCTACATCGGGCAGGCCGTCCACTTCCGGAAGACCTTCCAACTCTGAAAGACCTTC GGTCAATGAACGACCGTCTATTCCAAGCAGACCGTCCACTCCGGGCAGAAATGATAAACCGAATAAGGAAGTAACTCCGG GCAGAGGCCACAACAGAGGTGAAGGAGATCGTCATTCAGGAAGTCGTCCGGGAACGAGTACAAGTACTCCGAATTCTAAT CGTCGTCCGGAAACGAATTCAGGGTCTTCGAATTCCAGTCGCCGTCCGACAAGTAGTGGTACGAGCACAAACCGTGGCAG CAGCTCCGGTAGGAACAGCAATTCCGGCAGTAGTTCCAGCAGAGGGAACGTATCCGGCAGATCAACAGAAAGAAGCTCAT CTTCAGAAAGTTCGAGAAGCAACAGCAACCGAGGTTCTTCTTCCCGTTCTTCAGAAAGAGAAAGCAGCTCAAGAAGATAA
Upstream 100 bases:
>100_bases CCATACTGACGGATGTTTTCACTTTTGAGATGGACAAAAGAGAGATGAGGGAGTTTGCGGAATCTTACGATAGCGGACGT AACTAAAAAAGAATGAAACC
Downstream 100 bases:
>100_bases AACCTATTCCTTTATTAATAAATTATTGCTCCTCAGCGGTAGGAGAACTGGACTCCGGCGTTTCGCCGACTAGACTATTC AGGGCGTCGCCCGTAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR
Sequences:
>Translated_399_residues MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR >Mature_399_residues MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIYSLRNIMDYVVRGDEWALDDY YEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRWNFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYY RGRYNNLVHYPTPYRVRDQRVFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRGEGDRHSGSRPGTSTSTPNSN RRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSSRGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 G5 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011098 - InterPro: IPR005877 - InterPro: IPR019948 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF07501 G5; PF00746 Gram_pos_anchor; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 45285; Mature: 45285
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIY CHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECHHHHH SLRNIMDYVVRGDEWALDDYYEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRW HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEECCEEEECCEE NFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYYRGRYNNLVHYPTPYRVRDQR EEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHH VFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGDRHSGSRPGTSTSTPNSNRRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKRILFILLVVTASTTVMAGMSTSKVRKETRFLTDKMAYELDLNNPQYNDVYEINYDFIY CHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECHHHHH SLRNIMDYVVRGDEWALDDYYEALDIRNDDLRWVLSDVQYRRFLGAEYFYRPIYVTGGRW HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHEECCEEEECCEE NFRIYINYPNRSLFYFGVPYHYRTYCGAHYRPHIHHVSYYRGRYNNLVHYPTPYRVRDQR EEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHH VFHSYRRSDFGSVRFRPNTSVRPHNAPTRPGTSGRPGTTSRPNTSGRPGNTSRPRPETDH HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPSTSGRPSTSGRPSTSGRPSNSERPSVNERPSIPSRPSTPGRNDKPNKEVTPGRGHNRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGDRHSGSRPGTSTSTPNSNRRPETNSGSSNSSRRPTSSGTSTNRGSSSGRNSNSGSSSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGNVSGRSTERSSSSESSRSNSNRGSSSRSSERESSSRR CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]