Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347913

Identifier: 29347913

GI number: 29347913

Start: 3127725

End: 3128741

Strand: Reverse

Name: 29347913

Synonym: BT_2503

Alternate gene names: NA

Gene position: 3128741-3127725 (Counterclockwise)

Preceding gene: 29347914

Following gene: 29347912

Centisome position: 49.98

GC content: 42.48

Gene sequence:

>1017_bases
ATGAAAAATATACATATAATCCTGTTTTTCACGTTGTGGGTAATACTCGGTAGCTGTTCTACTTATTACGTATCCAACAA
GCAAGTGATGGAGGTTCAGCAGGGAATGTCCCGGCAGAATGTAGAAAAAATCTTGGGTAAACCGGATTACAGACGTTTTG
ACGGAGGTGGCGAGGAATGGGAGTACCACCGGATTTCTTCAGTGCTTTACGGCAACTCGATCAAGATTATTGTATATTTT
GCAGATGGAAGAGTTACGGGTATGGATACCTTTAATGGTGATGAAATACTTCTTCCGCCGCCTCCGGTTGTGATGTCTCC
TTCCGTTGTTGTAACCAATACGGATCCGGTTCGTCCGCCACGCTATGAAGAAAGTCCCCGTCGCAGAACACTTATGATGC
GTGATGAGTTTGATCGTTTTCTTAGTGATTTCCGGATGGTGATCATGTCTGATGAGCAGATTAAATATATAGATGACGTT
TTGTTGGATTGCAATTTTACTTCTGCCCAATGCGGAAAGATCATTGATCAGATAAGTGGTTCGGATGCCCAGATGACTGT
GATGAAACGTATGTATCCGCAAATTGTGGATAAAGAAAATTTTGCTTCGGTCGTCAATAAGCTCTTTTCGTCTTTTGACC
GTGACAAGATGAAGGAATATATCCAGGCTTACCACGGTGACCAACGACCGGGAGACGTAGGATATGTACGGCCCAGAGCT
ATGAGTTCAGCCGATTTTGACCGTTTCTTCAATGAATATAGAGGTAAATCTTTTGAGTCTGACCGTACCAGGATGCTGGA
TGAAGTTGTACCTCCTTCGGGATTCACTTGTGCCCAATGCCGTAAATTGGTGGATATGTGTACTTTTCAGACAGATAAAA
AGAATATGATAAAGAAACTTTATCCGAAAATCGCAGATAAGAAGAACTTCTCCATACTGACGGATGTTTTCACTTTTGAG
ATGGACAAAAGAGAGATGAGGGAGTTTGCGGAATCTTACGATAGCGGACGTAACTAA

Upstream 100 bases:

>100_bases
GTACTCTTACATTCTCCAGTAACAAGACCAAAATGAACGATTTCATCAAGGAATACGAAGGACGCTGATCATACATTAGT
TCACTAAAAACGATACGGTT

Downstream 100 bases:

>100_bases
AAAAGAATGAAACCATGAAAAGAATTCTATTTATATTGTTAGTCGTGACTGCCAGTACCACTGTAATGGCGGGAATGAGT
ACCAGCAAGGTACGTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF
ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV
LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA
MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE
MDKREMREFAESYDSGRN

Sequences:

>Translated_338_residues
MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF
ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV
LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA
MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE
MDKREMREFAESYDSGRN
>Mature_338_residues
MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF
ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV
LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA
MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE
MDKREMREFAESYDSGRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39372; Mature: 39372

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEW
CCCEEEHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC
EYHRISSVLYGNSIKIIVYFADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPP
HHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEECCCCCEECCCEEEECCCCCCCC
RYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDVLLDCNFTSAQCGKIIDQISG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
SDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKL
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
YPKIADKKNFSILTDVFTFEMDKREMREFAESYDSGRN
HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEW
CCCEEEHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC
EYHRISSVLYGNSIKIIVYFADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPP
HHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEECCCCCEECCCEEEECCCCCCCC
RYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDVLLDCNFTSAQCGKIIDQISG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
SDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKL
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
YPKIADKKNFSILTDVFTFEMDKREMREFAESYDSGRN
HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA