| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347913
Identifier: 29347913
GI number: 29347913
Start: 3127725
End: 3128741
Strand: Reverse
Name: 29347913
Synonym: BT_2503
Alternate gene names: NA
Gene position: 3128741-3127725 (Counterclockwise)
Preceding gene: 29347914
Following gene: 29347912
Centisome position: 49.98
GC content: 42.48
Gene sequence:
>1017_bases ATGAAAAATATACATATAATCCTGTTTTTCACGTTGTGGGTAATACTCGGTAGCTGTTCTACTTATTACGTATCCAACAA GCAAGTGATGGAGGTTCAGCAGGGAATGTCCCGGCAGAATGTAGAAAAAATCTTGGGTAAACCGGATTACAGACGTTTTG ACGGAGGTGGCGAGGAATGGGAGTACCACCGGATTTCTTCAGTGCTTTACGGCAACTCGATCAAGATTATTGTATATTTT GCAGATGGAAGAGTTACGGGTATGGATACCTTTAATGGTGATGAAATACTTCTTCCGCCGCCTCCGGTTGTGATGTCTCC TTCCGTTGTTGTAACCAATACGGATCCGGTTCGTCCGCCACGCTATGAAGAAAGTCCCCGTCGCAGAACACTTATGATGC GTGATGAGTTTGATCGTTTTCTTAGTGATTTCCGGATGGTGATCATGTCTGATGAGCAGATTAAATATATAGATGACGTT TTGTTGGATTGCAATTTTACTTCTGCCCAATGCGGAAAGATCATTGATCAGATAAGTGGTTCGGATGCCCAGATGACTGT GATGAAACGTATGTATCCGCAAATTGTGGATAAAGAAAATTTTGCTTCGGTCGTCAATAAGCTCTTTTCGTCTTTTGACC GTGACAAGATGAAGGAATATATCCAGGCTTACCACGGTGACCAACGACCGGGAGACGTAGGATATGTACGGCCCAGAGCT ATGAGTTCAGCCGATTTTGACCGTTTCTTCAATGAATATAGAGGTAAATCTTTTGAGTCTGACCGTACCAGGATGCTGGA TGAAGTTGTACCTCCTTCGGGATTCACTTGTGCCCAATGCCGTAAATTGGTGGATATGTGTACTTTTCAGACAGATAAAA AGAATATGATAAAGAAACTTTATCCGAAAATCGCAGATAAGAAGAACTTCTCCATACTGACGGATGTTTTCACTTTTGAG ATGGACAAAAGAGAGATGAGGGAGTTTGCGGAATCTTACGATAGCGGACGTAACTAA
Upstream 100 bases:
>100_bases GTACTCTTACATTCTCCAGTAACAAGACCAAAATGAACGATTTCATCAAGGAATACGAAGGACGCTGATCATACATTAGT TCACTAAAAACGATACGGTT
Downstream 100 bases:
>100_bases AAAAGAATGAAACCATGAAAAGAATTCTATTTATATTGTTAGTCGTGACTGCCAGTACCACTGTAATGGCGGGAATGAGT ACCAGCAAGGTACGTAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE MDKREMREFAESYDSGRN
Sequences:
>Translated_338_residues MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE MDKREMREFAESYDSGRN >Mature_338_residues MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEWEYHRISSVLYGNSIKIIVYF ADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPPRYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDV LLDCNFTSAQCGKIIDQISGSDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKLYPKIADKKNFSILTDVFTFE MDKREMREFAESYDSGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39372; Mature: 39372
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEW CCCEEEHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC EYHRISSVLYGNSIKIIVYFADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPP HHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEECCCCCEECCCEEEECCCCCCCC RYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDVLLDCNFTSAQCGKIIDQISG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC SDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH YPKIADKKNFSILTDVFTFEMDKREMREFAESYDSGRN HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNIHIILFFTLWVILGSCSTYYVSNKQVMEVQQGMSRQNVEKILGKPDYRRFDGGGEEW CCCEEEHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCC EYHRISSVLYGNSIKIIVYFADGRVTGMDTFNGDEILLPPPPVVMSPSVVVTNTDPVRPP HHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCEEEECCCCCEECCCEEEECCCCCCCC RYEESPRRRTLMMRDEFDRFLSDFRMVIMSDEQIKYIDDVLLDCNFTSAQCGKIIDQISG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC SDAQMTVMKRMYPQIVDKENFASVVNKLFSSFDRDKMKEYIQAYHGDQRPGDVGYVRPRA CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC MSSADFDRFFNEYRGKSFESDRTRMLDEVVPPSGFTCAQCRKLVDMCTFQTDKKNMIKKL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH YPKIADKKNFSILTDVFTFEMDKREMREFAESYDSGRN HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA