| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347890
Identifier: 29347890
GI number: 29347890
Start: 3102214
End: 3103584
Strand: Reverse
Name: 29347890
Synonym: BT_2480
Alternate gene names: NA
Gene position: 3103584-3102214 (Counterclockwise)
Preceding gene: 29347891
Following gene: 29347889
Centisome position: 49.58
GC content: 41.94
Gene sequence:
>1371_bases ATGAAAAAATTAACTTGCTTATTCGCCTTAGGTTTCTTGCTTTTTAACAATACTTTACGGGCTAATGAACCCGAAAAAGT AACCTCAACAGAAGAGGTATCTGAAACTGCGGCAAAGAAAGAGAGAATAAAACAGGTAACAAAAGATGACGACTACGAAA AGTTCCGTTTCGGTGGATACGGAGAGATGGTAGCAAAGTTTATGAATTACGGAACGAATCGTTTCTATGGTGGGGTCGAT AACAGTGATCACCGCAATACCATTGCGATTCCTCGTTTTGTGTTGGCTTTTGACTACAAGTTTAATTCCAAGTGGATACT GGGTGCTGAGATAGAGTTTGAAGCAGGAGGTGTAGGTCTTGAAACTGAACTTGAGAATTCAGAAAACGGTGAGTATGAGA CAGAAATGGAAAAGGGTGGAGAAGTCGCTCTTGAGCAGTTTCACATTACCCGTCTGATACATTCGGCTTTCAATATTCGT GCCGGTCATTTGATTGTACCTATGGGATTGACCAATGCACACCATGAGCCTATCAACTTCTTTGGAACATCTCGTCCTGA GGGTGAAACCACAATTATTCCTTCTACCTGGCATGAGACAGGATTGGAATTCTTCGGTTCTTTTGGTAAAGGATATGCGC GTTTTGATTATCAGGCAATGATTGTTGCCGGCTTGAATGCTGATGGTTTTGGTCGCGATAACTGGGTTGCCGGTGGTAAG CAGGGACTCTTTGAACAAGATAACTTTACTTCACCTGCTTATGTAGCACGTCTGGACTATAAAGGGGTATCGGGGTTGCG TGCAGGTGTTGCTTTTTACTATTGTAATGACGTGACGGCCAATGCTGATAAGAATTATAAGTATAGCAGTGTAGGCCACT CATCAGTGAAAATTTACTCTGCCGATGCACAGTATAAAAATAAATATGTTACCGCTCGTGGTAATATCATTTATGGTGAT TTAGAGAATTCTTCCAAGATCAGCAAGGTTACTCTTTCCAATAACTCCAATTATTATCACGGTGCTATGCGTAATGTAGC TAAGAATGCCCTGTGCTATGGCTTGGAGGCTGGTCTTAACCTGAGTGCTTTCTTCTCGCAGAAGAAATGTCCGGTTATTT ATCCTTATGCCCGTTATGAATACTACAACCCGCAGGAAGAGGCAGAAGGTTCTGCTACAATGGAGAAGCGCTGTCAGGTA AGCAAATGGACGGCAGGAGTTAACTGGTTTGCATTGCCGAATCTGGTTGTAAAGGCCGATTATACTACCCGTCATATTGG TACGAACAAGGTATTTGGATCGACTAAATATAACAATGAAAATGAATTTGCTATCGGTATAGCTTATGTCGGTTGGTTTA CCAAGAGATAG
Upstream 100 bases:
>100_bases CCTACTTATTATTATTTTTAATAACACAATACTCATATTTGGGTATTGCCCGCCTTTTTAACTCCCTCTACTTTTGCGCC AACAAAATTTAAGATAAAAG
Downstream 100 bases:
>100_bases TTCAAATAGGTATTTATAATTAATTTAATGTTTAAGTAATATGAAAAAGTTTTTTTATTTGTCGGCTCTTTCATTGGGCA TGATGTGTTCCATTACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MKKLTCLFALGFLLFNNTLRANEPEKVTSTEEVSETAAKKERIKQVTKDDDYEKFRFGGYGEMVAKFMNYGTNRFYGGVD NSDHRNTIAIPRFVLAFDYKFNSKWILGAEIEFEAGGVGLETELENSENGEYETEMEKGGEVALEQFHITRLIHSAFNIR AGHLIVPMGLTNAHHEPINFFGTSRPEGETTIIPSTWHETGLEFFGSFGKGYARFDYQAMIVAGLNADGFGRDNWVAGGK QGLFEQDNFTSPAYVARLDYKGVSGLRAGVAFYYCNDVTANADKNYKYSSVGHSSVKIYSADAQYKNKYVTARGNIIYGD LENSSKISKVTLSNNSNYYHGAMRNVAKNALCYGLEAGLNLSAFFSQKKCPVIYPYARYEYYNPQEEAEGSATMEKRCQV SKWTAGVNWFALPNLVVKADYTTRHIGTNKVFGSTKYNNENEFAIGIAYVGWFTKR
Sequences:
>Translated_456_residues MKKLTCLFALGFLLFNNTLRANEPEKVTSTEEVSETAAKKERIKQVTKDDDYEKFRFGGYGEMVAKFMNYGTNRFYGGVD NSDHRNTIAIPRFVLAFDYKFNSKWILGAEIEFEAGGVGLETELENSENGEYETEMEKGGEVALEQFHITRLIHSAFNIR AGHLIVPMGLTNAHHEPINFFGTSRPEGETTIIPSTWHETGLEFFGSFGKGYARFDYQAMIVAGLNADGFGRDNWVAGGK QGLFEQDNFTSPAYVARLDYKGVSGLRAGVAFYYCNDVTANADKNYKYSSVGHSSVKIYSADAQYKNKYVTARGNIIYGD LENSSKISKVTLSNNSNYYHGAMRNVAKNALCYGLEAGLNLSAFFSQKKCPVIYPYARYEYYNPQEEAEGSATMEKRCQV SKWTAGVNWFALPNLVVKADYTTRHIGTNKVFGSTKYNNENEFAIGIAYVGWFTKR >Mature_456_residues MKKLTCLFALGFLLFNNTLRANEPEKVTSTEEVSETAAKKERIKQVTKDDDYEKFRFGGYGEMVAKFMNYGTNRFYGGVD NSDHRNTIAIPRFVLAFDYKFNSKWILGAEIEFEAGGVGLETELENSENGEYETEMEKGGEVALEQFHITRLIHSAFNIR AGHLIVPMGLTNAHHEPINFFGTSRPEGETTIIPSTWHETGLEFFGSFGKGYARFDYQAMIVAGLNADGFGRDNWVAGGK QGLFEQDNFTSPAYVARLDYKGVSGLRAGVAFYYCNDVTANADKNYKYSSVGHSSVKIYSADAQYKNKYVTARGNIIYGD LENSSKISKVTLSNNSNYYHGAMRNVAKNALCYGLEAGLNLSAFFSQKKCPVIYPYARYEYYNPQEEAEGSATMEKRCQV SKWTAGVNWFALPNLVVKADYTTRHIGTNKVFGSTKYNNENEFAIGIAYVGWFTKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51218; Mature: 51218
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTCLFALGFLLFNNTLRANEPEKVTSTEEVSETAAKKERIKQVTKDDDYEKFRFGGY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCH GEMVAKFMNYGTNRFYGGVDNSDHRNTIAIPRFVLAFDYKFNSKWILGAEIEFEAGGVGL HHHHHHHHHCCCCEEECCCCCCCCCCEEECCEEEEEEEEEECCCEEEEEEEEECCCCCCE ETELENSENGEYETEMEKGGEVALEQFHITRLIHSAFNIRAGHLIVPMGLTNAHHEPINF EEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEE FGTSRPEGETTIIPSTWHETGLEFFGSFGKGYARFDYQAMIVAGLNADGFGRDNWVAGGK CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEECEEEEEEEECCCCCCCCCCCCCCCC QGLFEQDNFTSPAYVARLDYKGVSGLRAGVAFYYCNDVTANADKNYKYSSVGHSSVKIYS CCCCCCCCCCCCEEEEEECCCCCCCHHHCEEEEEECCEECCCCCCEEEECCCCCEEEEEE ADAQYKNKYVTARGNIIYGDLENSSKISKVTLSNNSNYYHGAMRNVAKNALCYGLEAGLN CCCCCCCCEEEECCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHHHEEECCCCCC LSAFFSQKKCPVIYPYARYEYYNPQEEAEGSATMEKRCQVSKWTAGVNWFALPNLVVKAD CHHHHCCCCCCEEEEHHHCCCCCCHHHCCCCHHHHHHCCHHHHCCCCEEEECCCEEEEEC YTTRHIGTNKVFGSTKYNNENEFAIGIAYVGWFTKR CCEEECCCCCEECCCCCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure MKKLTCLFALGFLLFNNTLRANEPEKVTSTEEVSETAAKKERIKQVTKDDDYEKFRFGGY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCH GEMVAKFMNYGTNRFYGGVDNSDHRNTIAIPRFVLAFDYKFNSKWILGAEIEFEAGGVGL HHHHHHHHHCCCCEEECCCCCCCCCCEEECCEEEEEEEEEECCCEEEEEEEEECCCCCCE ETELENSENGEYETEMEKGGEVALEQFHITRLIHSAFNIRAGHLIVPMGLTNAHHEPINF EEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEE FGTSRPEGETTIIPSTWHETGLEFFGSFGKGYARFDYQAMIVAGLNADGFGRDNWVAGGK CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEECEEEEEEEECCCCCCCCCCCCCCCC QGLFEQDNFTSPAYVARLDYKGVSGLRAGVAFYYCNDVTANADKNYKYSSVGHSSVKIYS CCCCCCCCCCCCEEEEEECCCCCCCHHHCEEEEEECCEECCCCCCEEEECCCCCEEEEEE ADAQYKNKYVTARGNIIYGDLENSSKISKVTLSNNSNYYHGAMRNVAKNALCYGLEAGLN CCCCCCCCEEEECCCEEEEECCCCCCEEEEEEECCCCEEHHHHHHHHHHHHEEECCCCCC LSAFFSQKKCPVIYPYARYEYYNPQEEAEGSATMEKRCQVSKWTAGVNWFALPNLVVKAD CHHHHCCCCCCEEEEHHHCCCCCCHHHCCCCHHHHHHCCHHHHCCCCEEEECCCEEEEEC YTTRHIGTNKVFGSTKYNNENEFAIGIAYVGWFTKR CCEEECCCCCEECCCCCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]