| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347883
Identifier: 29347883
GI number: 29347883
Start: 3092096
End: 3094216
Strand: Reverse
Name: 29347883
Synonym: BT_2473
Alternate gene names: NA
Gene position: 3094216-3092096 (Counterclockwise)
Preceding gene: 29347884
Following gene: 29347882
Centisome position: 49.43
GC content: 48.8
Gene sequence:
>2121_bases ATGCACCCAAAGAGAACGCCCGGTACGTGTTTTCCGGGTAGGGGCAGGCCGGCTCCCCCCCGTATCAGCGTGACCGTGCC GGAAGAGGTGAGCCAACAGGAGGACCTGCTGGTAGCCCGGTCATCTGAGCTCGGGGGAAACAGTAACACGGCTGTTGCAC TGACCTTCAACCATGCACTGACCGCCGTCAGATTCGTGTGCGGGAATGATATGCGGGAAGGTACGGTCAAGCAGGTCCGT TTGAAAAACGTTTATTCCAGAGGAACTTACAATATGGGGACACAAACCTGGAGCGGTTTGGATACTCCCGCCTCCTTCTC ACAGGCATTGGATAAAGTGACGACAGGAACAGCTGACGAGGCGCTCACGAGTGAGGCGCAGACCTTTATGATGCTGCCCC AGCGGTTTCCTGAGGGCGCGCAGATAGAAGTCTTATTCACAGACGACACCCATACAGGCCACACTTTAATAGCCGATATA AAAGGAAGTGAGTGGCCGATGGGCAAGACTGTGACCTACAAAATATCCAGTAGTTCTCTCAACTGGACTTACACGCTTGA TGTCACTGCCCTGGCCGATTTTACATATACCGGTGGTACACAGCAATATTGTGTTACCAGTTACAGGCAAAACGCCCAAG GGGAAAAAGAAGCTGCCGAATGGACCGCACAATATGCAGAAGACGGAACCACGTGGACAGACACCAAGCCGGTATGGCTT ACCGCATTCACGGCATCTGGTACCGGCGGTGAATTTGCGCAACCTTGTGATGCGACGGTCGAGGCGCAGACCGGAATATC AAATGATTTACATGAGAATGCTTTGAAGGCGGCCACAGCCAAGGGATCGGAAACCACACCGTATAACCTTTCCAACAACA CCGGGGGGAATACTGTTGAGAACACTGCCAACTGTTACGTGGTCAACGCTCCCGGTTACTATTCTTTGCCGCTGGTATAT GGCAATGCGATCAAGAACTCAGCCACGAACGCTTCCGCGTATACCTCCACGGTGACAGGAACCAATATCCTGAATCCTTT CATCAACCATGCCGGGAACGGGATCACGGATCCATACATCAGCGGTAATGGATGTACGCCGGCCAAGGCCGAACTGGTCT GGCAGGATGCGATGAACCTGGTTACGGATATAAAATACAATGCCGATTCCAATGGCGGCAATATCTCTTTCAAAGTGGAC CGTTCTTCCATCCGGCAAGGCAATGCCGTCATTGCGATCAAGGATGTGAGTGATGCCATCCTCTGGTCCTGGCATGTCTG GGTTACAGACGAAGACATTAACAATGTGATTGAGATAACCAATCATCAAAACGTAAAATATAATTTTATGCCCGTTAATC TGGGACAATGCGACGGTAATACCATCACCTATGAAGAACGGAGTTGCAAGGTAAAATTCATTGCCGGGGACCAGAGTAAG GAAATAACCATCAAGCAGTTGGCGAACGTAATCGCTACCGGAAGTAATGCTCCTTTTTATCAATGGGGACGTAAAGATCC GCTCTACCCTTCGAACGGAATGGGTAACACAACCAAAATCTGGTATGACAAGGAGGGAATTCCATCTACAGCAAATCCTA TGAAAGGAACCTTTTCGGCCGGGAATGATTGTATCAAGAACTGTATTCTCAATCCTAATCTGATGCACAATAGATATAAT GGAGATTATACCTATTACAACCTGTGGAGTGCCGATAATAAAACAACTTCTGCCAATGACAATCCTGTTAACAAGACTAT TTACGATCCGTGTCCCGTTGGTTTTAAACTTCCTGCCAGTAACGCTTTCACAGGATTTACCACAACAGGAGAAAGTGTAT CATCTTCCACTCAAGTTAACGGTACCTGGAGTAGTTCGGAAAAAGGTTGGTATTTTTATACAAATTCCGAAAAAACACAG AGCATTTTCTTCCCGGCGTTAGGGTATCGTAGTTATTCCACTATGCGGCCAGGTAGTATCGGGACACAGGGTTGCTTCTG GTCGGCACATCCGGTAGCGAAGGGCAATAATTATTACCTTAGAACTAGCTCAGTAGACGTACAGCCAACATATATGGTCG ATCGGGGATTCGGGTATGCGCTCCGTCCTTGCCAAGACTAA
Upstream 100 bases:
>100_bases TTACTTCGGAGTAAATTATCTGCTGGGCGGTATGCATAGCTATGCCTGATTATCTTTCTATTTTCGGATGATATAATAAA AATGCCTGCGGAATTCGCCT
Downstream 100 bases:
>100_bases AGGGTTGCAATAAAAACAAGGAGCTGCTTACTAACACAGTTGCAGCTCGAGAAAGAACACGGCACAGAGGGAAAAAAGGT AAGTCAAATTAGCCGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD
Sequences:
>Translated_706_residues MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD >Mature_706_residues MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77066; Mature: 77066
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHAL CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCCEEEEEECHHH TAVRFVCGNDMREGTVKQVRLKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADIKGSEWPMGKTVTYKISSSSL HHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC NWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL EEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCCEEE TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVE EEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC NTANCYVVNAPGYYSLPLVYGNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYI CCCCEEEEECCCCEEEEEEECCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEE SGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVDRSSIRQGNAVIAIKDVSDAI CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEECCCEE LWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK EEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSA CEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GNDCIKNCILNPNLMHNRYNGDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPAS CHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCC NAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQSIFFPALGYRSYSTMRPGSI CCCCCEECCCCCCCCCCEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC GTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD CCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHAL CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCCEEEEEECHHH TAVRFVCGNDMREGTVKQVRLKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADE HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADIKGSEWPMGKTVTYKISSSSL HHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC NWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL EEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCCEEE TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVE EEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC NTANCYVVNAPGYYSLPLVYGNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYI CCCCEEEEECCCCEEEEEEECCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEE SGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVDRSSIRQGNAVIAIKDVSDAI CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEECCCEE LWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK EEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSA CEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC GNDCIKNCILNPNLMHNRYNGDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPAS CHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCC NAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQSIFFPALGYRSYSTMRPGSI CCCCCEECCCCCCCCCCEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC GTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD CCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA