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The map label for this gene is nrfI [H]

Identifier: 29347884

GI number: 29347884

Start: 3094268

End: 3096328

Strand: Reverse

Name: nrfI [H]

Synonym: BT_2474

Alternate gene names: 29347884

Gene position: 3096328-3094268 (Counterclockwise)

Preceding gene: 29347885

Following gene: 29347883

Centisome position: 49.46

GC content: 45.41

Gene sequence:

>2061_bases
ATGCACCTTTTTAATCTGAAGAAAAGTCTCGTCTCCTTATATATCTGTCTGGTGGCTTTACTTGCTGTGGTGACCTTTGT
GGAGCATGTACGCGGAACAGAGTTTGTAGAAAAGTATGTTTATCATACAGTTTGGTTTTGTTGTTTGTGGGGAGTACTTG
CTGCATTGGCAGTTGTCGTGTTGGTTAAGCGGCAGTTGTGGCGGCATCTCCCGGCATTGTTGTTGCATGGCTCCTTCCTT
TTTATCTTGGTGGGAGCCATGATTACATTTTCATGCAGCAAGAAAGGATATATGCATCTCACAGTAGGCACTGAGGTGGG
AACTTTCATAGACCAAGACAGTAAGCGGGTGATCGAATTACCATTCACATTGTGTCTGGACAGTTTCCGGGTGGAGTATT
ATCCGGGGACGGAGGCTCCGGCAGATTATGTCAGCTATATCCGGGATGCGGAACCAGTTTCCATGAATCGTATCCTCTCT
CGTCAGGGGTATCGCTTTTACCAGTCTTCTTTTGATGATGATAAGGAGGGGAGTTGGTTGTCAGTGAATTATGATCCGTG
GGGAATAGGGGTTACGTATGCAGGATATATTTTGCTGGGTATCTCCATGTTGTGGATGCTTGTCGGTCGCAGTGGAGAAT
TCCGTAGATTACTCAGGCATCCATTGCTTCGGAAAGGGGGAATGTTTGTGTGGTTGCTCATGGCTGTGGTAACGGTGGTG
CAAGCAGAAAACAGAAGCCTTCCGGCACTTGCACTCAGGCAGGCGGATAGTCTGGCATTCAAACAAGTGATTTATCATGA
TCGCGTAGTACCTTTTAATACTCTTGCACGAGACTTTGTATTGAAACTGACCGGAAAACCTTCTTATGGTGGTATGACAC
CCGAACAGGTTGTCGGAGGTTGGCTACTTCGTCCGGAGGTTTGGCAGAATGAACCGATGATTTATATAAAGAGTGCGGAA
CTTCGTCATTTACTCCGGTTATCGTCTTCTTATGCCCGTCTTACTGATTTGTTTGATGGACAAAACTATCGATTGCAGGA
ATTTTGGAAGGGTGGACAAAAGCCACATATGAAAATGACTTCGTTGGAAAAGGCTATCATGGAAACGGACGAAAAGGTAG
GATTGATACTGATGCTACGGAGTGGAACACTTATCCATCCTTTACCGGAAGATGGGAGTATAAAACCACTATCTGACGTA
AAAGTGCAGGCTGAAATATTGTACAATCGTATTCCATTCAGCAAACTGTTGTTCATGTTCAATCTGACTGTAGGGATGCT
GGCATTTTTCTATTTACTTTATTGCAGCATGCATCGTTCGGCAGGTAAGGCATGGAGCGTTTTTACAGTTGCACTTTATG
CAGCATTCCTTTTTCAACTCTTTGGCTACTGTTTGCGGTGGTATGTTGGCGGACGTATTCCGTTGAGCAATGGATATGAA
ACCATGCAATTTATGGCACTGTGTACACTTCTGCTTGCATGCATATTCCGGTGTCGCTTCTCTTTTACGTTGTCTTTTGG
ATTGCTCATTTCGGGTTTTGCCTTGTTGGTAGCTTATCTTGGGCAGAACAATCCTCAGATCACTCCTCTGATGCCTGTGT
TGCTGTCTCCCTGGTTAAGTATTCATGTTTCTCTGATTATGGTATCTTATGCATTGTTTGCCTTTATGATGCTAAATGGA
TTACTGGCATTCTGCATAGGAGGTTGGCGAAAAAAGGCAATCGATTCGGAGATTCAGGAACAGCGTAAGGTCCGTGTGGA
GCAATTGATGCTTTTCAGTCGGTTGATGCTCTATCCGGCAGTATTTTGTCTGGGGGCGGGAATTTTTATTGGTGCTGTGT
GGGCAAATGTTTCATGGGGGCGTTATTGGGCCTGGGACCCGAAAGAAGTCTGGGCTTTGATCTCCTTTTTAATCTATGGT
GCGGCATTCCACGGACCATCGCTTGCCGTCTTCCGGCAACCCCGGTTCTTCCATGCTTATATGGTGTTGGCTTTCCTTAC
GGTGCTGATGACTTACTTCGGAGTAAATTATCTGCTGGGCGGTATGCATAGCTATGCCTGA

Upstream 100 bases:

>100_bases
CCAGATACTCCTAAAGTATTTGTACATGCGCCTGTATGCCGTCCCGGATGGTTGATCGAAATGGAATGTATGGGAGTTAA
GGCTTTGAAGAATAAGGAAT

Downstream 100 bases:

>100_bases
TTATCTTTCTATTTTCGGATGATATAATAAAAATGCCTGCGGAATTCGCCTATGCACCCAAAGAGAACGCCCGGTACGTG
TTTTCCGGGTAGGGGCAGGC

Product: cytochrome c biogenesis protein CcsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MHLFNLKKSLVSLYICLVALLAVVTFVEHVRGTEFVEKYVYHTVWFCCLWGVLAALAVVVLVKRQLWRHLPALLLHGSFL
FILVGAMITFSCSKKGYMHLTVGTEVGTFIDQDSKRVIELPFTLCLDSFRVEYYPGTEAPADYVSYIRDAEPVSMNRILS
RQGYRFYQSSFDDDKEGSWLSVNYDPWGIGVTYAGYILLGISMLWMLVGRSGEFRRLLRHPLLRKGGMFVWLLMAVVTVV
QAENRSLPALALRQADSLAFKQVIYHDRVVPFNTLARDFVLKLTGKPSYGGMTPEQVVGGWLLRPEVWQNEPMIYIKSAE
LRHLLRLSSSYARLTDLFDGQNYRLQEFWKGGQKPHMKMTSLEKAIMETDEKVGLILMLRSGTLIHPLPEDGSIKPLSDV
KVQAEILYNRIPFSKLLFMFNLTVGMLAFFYLLYCSMHRSAGKAWSVFTVALYAAFLFQLFGYCLRWYVGGRIPLSNGYE
TMQFMALCTLLLACIFRCRFSFTLSFGLLISGFALLVAYLGQNNPQITPLMPVLLSPWLSIHVSLIMVSYALFAFMMLNG
LLAFCIGGWRKKAIDSEIQEQRKVRVEQLMLFSRLMLYPAVFCLGAGIFIGAVWANVSWGRYWAWDPKEVWALISFLIYG
AAFHGPSLAVFRQPRFFHAYMVLAFLTVLMTYFGVNYLLGGMHSYA

Sequences:

>Translated_686_residues
MHLFNLKKSLVSLYICLVALLAVVTFVEHVRGTEFVEKYVYHTVWFCCLWGVLAALAVVVLVKRQLWRHLPALLLHGSFL
FILVGAMITFSCSKKGYMHLTVGTEVGTFIDQDSKRVIELPFTLCLDSFRVEYYPGTEAPADYVSYIRDAEPVSMNRILS
RQGYRFYQSSFDDDKEGSWLSVNYDPWGIGVTYAGYILLGISMLWMLVGRSGEFRRLLRHPLLRKGGMFVWLLMAVVTVV
QAENRSLPALALRQADSLAFKQVIYHDRVVPFNTLARDFVLKLTGKPSYGGMTPEQVVGGWLLRPEVWQNEPMIYIKSAE
LRHLLRLSSSYARLTDLFDGQNYRLQEFWKGGQKPHMKMTSLEKAIMETDEKVGLILMLRSGTLIHPLPEDGSIKPLSDV
KVQAEILYNRIPFSKLLFMFNLTVGMLAFFYLLYCSMHRSAGKAWSVFTVALYAAFLFQLFGYCLRWYVGGRIPLSNGYE
TMQFMALCTLLLACIFRCRFSFTLSFGLLISGFALLVAYLGQNNPQITPLMPVLLSPWLSIHVSLIMVSYALFAFMMLNG
LLAFCIGGWRKKAIDSEIQEQRKVRVEQLMLFSRLMLYPAVFCLGAGIFIGAVWANVSWGRYWAWDPKEVWALISFLIYG
AAFHGPSLAVFRQPRFFHAYMVLAFLTVLMTYFGVNYLLGGMHSYA
>Mature_686_residues
MHLFNLKKSLVSLYICLVALLAVVTFVEHVRGTEFVEKYVYHTVWFCCLWGVLAALAVVVLVKRQLWRHLPALLLHGSFL
FILVGAMITFSCSKKGYMHLTVGTEVGTFIDQDSKRVIELPFTLCLDSFRVEYYPGTEAPADYVSYIRDAEPVSMNRILS
RQGYRFYQSSFDDDKEGSWLSVNYDPWGIGVTYAGYILLGISMLWMLVGRSGEFRRLLRHPLLRKGGMFVWLLMAVVTVV
QAENRSLPALALRQADSLAFKQVIYHDRVVPFNTLARDFVLKLTGKPSYGGMTPEQVVGGWLLRPEVWQNEPMIYIKSAE
LRHLLRLSSSYARLTDLFDGQNYRLQEFWKGGQKPHMKMTSLEKAIMETDEKVGLILMLRSGTLIHPLPEDGSIKPLSDV
KVQAEILYNRIPFSKLLFMFNLTVGMLAFFYLLYCSMHRSAGKAWSVFTVALYAAFLFQLFGYCLRWYVGGRIPLSNGYE
TMQFMALCTLLLACIFRCRFSFTLSFGLLISGFALLVAYLGQNNPQITPLMPVLLSPWLSIHVSLIMVSYALFAFMMLNG
LLAFCIGGWRKKAIDSEIQEQRKVRVEQLMLFSRLMLYPAVFCLGAGIFIGAVWANVSWGRYWAWDPKEVWALISFLIYG
AAFHGPSLAVFRQPRFFHAYMVLAFLTVLMTYFGVNYLLGGMHSYA

Specific function: May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR007816 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm; PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 78320; Mature: 78320

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHLFNLKKSLVSLYICLVALLAVVTFVEHVRGTEFVEKYVYHTVWFCCLWGVLAALAVVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKRQLWRHLPALLLHGSFLFILVGAMITFSCSKKGYMHLTVGTEVGTFIDQDSKRVIEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCEEHH
PFTLCLDSFRVEYYPGTEAPADYVSYIRDAEPVSMNRILSRQGYRFYQSSFDDDKEGSWL
HHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCEE
SVNYDPWGIGVTYAGYILLGISMLWMLVGRSGEFRRLLRHPLLRKGGMFVWLLMAVVTVV
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QAENRSLPALALRQADSLAFKQVIYHDRVVPFNTLARDFVLKLTGKPSYGGMTPEQVVGG
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCHHHHHCC
WLLRPEVWQNEPMIYIKSAELRHLLRLSSSYARLTDLFDGQNYRLQEFWKGGQKPHMKMT
CCCCCHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHH
SLEKAIMETDEKVGLILMLRSGTLIHPLPEDGSIKPLSDVKVQAEILYNRIPFSKLLFMF
HHHHHHHHCCCCCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
NLTVGMLAFFYLLYCSMHRSAGKAWSVFTVALYAAFLFQLFGYCLRWYVGGRIPLSNGYE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
TMQFMALCTLLLACIFRCRFSFTLSFGLLISGFALLVAYLGQNNPQITPLMPVLLSPWLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHH
IHVSLIMVSYALFAFMMLNGLLAFCIGGWRKKAIDSEIQEQRKVRVEQLMLFSRLMLYPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFCLGAGIFIGAVWANVSWGRYWAWDPKEVWALISFLIYGAAFHGPSLAVFRQPRFFHAY
HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
MVLAFLTVLMTYFGVNYLLGGMHSYA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]