| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347882
Identifier: 29347882
GI number: 29347882
Start: 3091319
End: 3091642
Strand: Reverse
Name: 29347882
Synonym: BT_2472
Alternate gene names: NA
Gene position: 3091642-3091319 (Counterclockwise)
Preceding gene: 29347883
Following gene: 29347879
Centisome position: 49.38
GC content: 35.8
Gene sequence:
>324_bases ATGACACGATCAGGAAATACTCGGAATGGGAAATATATGGGAGAGGATAAAAGGAGATATCATACTATAACGAATATATT ACAATATAATCTGATCCCTGATTTTTTTACTATATTTGCAAAGTATTGTATAACATTTAAAAATATGACCATGGAAAAAA CATTTGCACAAATCAGTGAATTGTTTGATCAATTTTCAAAAGATGCCAGCCTCCAGGTAGAAAAAGGAAACAAAGCTGCC GGAACCCGTGCCCGCAAAGCATCACTCGAACTTGAAAAACTCCTCAAACGTTTCAGAAAAGAGTCACTCGAAGCCTCGAA GTAA
Upstream 100 bases:
>100_bases GGTATTTCACATTATTATCCTGCACTCGTTGCATCCACTGCGGTTTTCCCACTTTTTATCACTAACTTTATAGATAAAAT CCCTCCGAAGAGAATTGCCA
Downstream 100 bases:
>100_bases TTTTTACTCTGGTCTCGACGGTATGGAAATGGCGGCATAGCGTGTACCATATCGAAAAAAAACTTTTCGTTTCACAGCGG GGAGGCTTTATTAGTTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTRSGNTRNGKYMGEDKRRYHTITNILQYNLIPDFFTIFAKYCITFKNMTMEKTFAQISELFDQFSKDASLQVEKGNKAA GTRARKASLELEKLLKRFRKESLEASK
Sequences:
>Translated_107_residues MTRSGNTRNGKYMGEDKRRYHTITNILQYNLIPDFFTIFAKYCITFKNMTMEKTFAQISELFDQFSKDASLQVEKGNKAA GTRARKASLELEKLLKRFRKESLEASK >Mature_106_residues TRSGNTRNGKYMGEDKRRYHTITNILQYNLIPDFFTIFAKYCITFKNMTMEKTFAQISELFDQFSKDASLQVEKGNKAAG TRARKASLELEKLLKRFRKESLEASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12487; Mature: 12355
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSGNTRNGKYMGEDKRRYHTITNILQYNLIPDFFTIFAKYCITFKNMTMEKTFAQISE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LFDQFSKDASLQVEKGNKAAGTRARKASLELEKLLKRFRKESLEASK HHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRSGNTRNGKYMGEDKRRYHTITNILQYNLIPDFFTIFAKYCITFKNMTMEKTFAQISE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LFDQFSKDASLQVEKGNKAAGTRARKASLELEKLLKRFRKESLEASK HHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA