Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347883

Identifier: 29347883

GI number: 29347883

Start: 3092096

End: 3094216

Strand: Reverse

Name: 29347883

Synonym: BT_2473

Alternate gene names: NA

Gene position: 3094216-3092096 (Counterclockwise)

Preceding gene: 29347884

Following gene: 29347882

Centisome position: 49.43

GC content: 48.8

Gene sequence:

>2121_bases
ATGCACCCAAAGAGAACGCCCGGTACGTGTTTTCCGGGTAGGGGCAGGCCGGCTCCCCCCCGTATCAGCGTGACCGTGCC
GGAAGAGGTGAGCCAACAGGAGGACCTGCTGGTAGCCCGGTCATCTGAGCTCGGGGGAAACAGTAACACGGCTGTTGCAC
TGACCTTCAACCATGCACTGACCGCCGTCAGATTCGTGTGCGGGAATGATATGCGGGAAGGTACGGTCAAGCAGGTCCGT
TTGAAAAACGTTTATTCCAGAGGAACTTACAATATGGGGACACAAACCTGGAGCGGTTTGGATACTCCCGCCTCCTTCTC
ACAGGCATTGGATAAAGTGACGACAGGAACAGCTGACGAGGCGCTCACGAGTGAGGCGCAGACCTTTATGATGCTGCCCC
AGCGGTTTCCTGAGGGCGCGCAGATAGAAGTCTTATTCACAGACGACACCCATACAGGCCACACTTTAATAGCCGATATA
AAAGGAAGTGAGTGGCCGATGGGCAAGACTGTGACCTACAAAATATCCAGTAGTTCTCTCAACTGGACTTACACGCTTGA
TGTCACTGCCCTGGCCGATTTTACATATACCGGTGGTACACAGCAATATTGTGTTACCAGTTACAGGCAAAACGCCCAAG
GGGAAAAAGAAGCTGCCGAATGGACCGCACAATATGCAGAAGACGGAACCACGTGGACAGACACCAAGCCGGTATGGCTT
ACCGCATTCACGGCATCTGGTACCGGCGGTGAATTTGCGCAACCTTGTGATGCGACGGTCGAGGCGCAGACCGGAATATC
AAATGATTTACATGAGAATGCTTTGAAGGCGGCCACAGCCAAGGGATCGGAAACCACACCGTATAACCTTTCCAACAACA
CCGGGGGGAATACTGTTGAGAACACTGCCAACTGTTACGTGGTCAACGCTCCCGGTTACTATTCTTTGCCGCTGGTATAT
GGCAATGCGATCAAGAACTCAGCCACGAACGCTTCCGCGTATACCTCCACGGTGACAGGAACCAATATCCTGAATCCTTT
CATCAACCATGCCGGGAACGGGATCACGGATCCATACATCAGCGGTAATGGATGTACGCCGGCCAAGGCCGAACTGGTCT
GGCAGGATGCGATGAACCTGGTTACGGATATAAAATACAATGCCGATTCCAATGGCGGCAATATCTCTTTCAAAGTGGAC
CGTTCTTCCATCCGGCAAGGCAATGCCGTCATTGCGATCAAGGATGTGAGTGATGCCATCCTCTGGTCCTGGCATGTCTG
GGTTACAGACGAAGACATTAACAATGTGATTGAGATAACCAATCATCAAAACGTAAAATATAATTTTATGCCCGTTAATC
TGGGACAATGCGACGGTAATACCATCACCTATGAAGAACGGAGTTGCAAGGTAAAATTCATTGCCGGGGACCAGAGTAAG
GAAATAACCATCAAGCAGTTGGCGAACGTAATCGCTACCGGAAGTAATGCTCCTTTTTATCAATGGGGACGTAAAGATCC
GCTCTACCCTTCGAACGGAATGGGTAACACAACCAAAATCTGGTATGACAAGGAGGGAATTCCATCTACAGCAAATCCTA
TGAAAGGAACCTTTTCGGCCGGGAATGATTGTATCAAGAACTGTATTCTCAATCCTAATCTGATGCACAATAGATATAAT
GGAGATTATACCTATTACAACCTGTGGAGTGCCGATAATAAAACAACTTCTGCCAATGACAATCCTGTTAACAAGACTAT
TTACGATCCGTGTCCCGTTGGTTTTAAACTTCCTGCCAGTAACGCTTTCACAGGATTTACCACAACAGGAGAAAGTGTAT
CATCTTCCACTCAAGTTAACGGTACCTGGAGTAGTTCGGAAAAAGGTTGGTATTTTTATACAAATTCCGAAAAAACACAG
AGCATTTTCTTCCCGGCGTTAGGGTATCGTAGTTATTCCACTATGCGGCCAGGTAGTATCGGGACACAGGGTTGCTTCTG
GTCGGCACATCCGGTAGCGAAGGGCAATAATTATTACCTTAGAACTAGCTCAGTAGACGTACAGCCAACATATATGGTCG
ATCGGGGATTCGGGTATGCGCTCCGTCCTTGCCAAGACTAA

Upstream 100 bases:

>100_bases
TTACTTCGGAGTAAATTATCTGCTGGGCGGTATGCATAGCTATGCCTGATTATCTTTCTATTTTCGGATGATATAATAAA
AATGCCTGCGGAATTCGCCT

Downstream 100 bases:

>100_bases
AGGGTTGCAATAAAAACAAGGAGCTGCTTACTAACACAGTTGCAGCTCGAGAAAGAACACGGCACAGAGGGAAAAAAGGT
AAGTCAAATTAGCCGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR
LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI
KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL
TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY
GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD
RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK
EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN
GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ
SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD

Sequences:

>Translated_706_residues
MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR
LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI
KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL
TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY
GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD
RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK
EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN
GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ
SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD
>Mature_706_residues
MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHALTAVRFVCGNDMREGTVKQVR
LKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADEALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADI
KGSEWPMGKTVTYKISSSSLNWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL
TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVENTANCYVVNAPGYYSLPLVY
GNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYISGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVD
RSSIRQGNAVIAIKDVSDAILWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK
EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSAGNDCIKNCILNPNLMHNRYN
GDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPASNAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQ
SIFFPALGYRSYSTMRPGSIGTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77066; Mature: 77066

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHAL
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCCEEEEEECHHH
TAVRFVCGNDMREGTVKQVRLKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADE
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
ALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADIKGSEWPMGKTVTYKISSSSL
HHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC
NWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL
EEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCCEEE
TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVE
EEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC
NTANCYVVNAPGYYSLPLVYGNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYI
CCCCEEEEECCCCEEEEEEECCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEE
SGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVDRSSIRQGNAVIAIKDVSDAI
CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEECCCEE
LWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK
EEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC
EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSA
CEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
GNDCIKNCILNPNLMHNRYNGDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPAS
CHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
NAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQSIFFPALGYRSYSTMRPGSI
CCCCCEECCCCCCCCCCEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
GTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD
CCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MHPKRTPGTCFPGRGRPAPPRISVTVPEEVSQQEDLLVARSSELGGNSNTAVALTFNHAL
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCCEEEEEECHHH
TAVRFVCGNDMREGTVKQVRLKNVYSRGTYNMGTQTWSGLDTPASFSQALDKVTTGTADE
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
ALTSEAQTFMMLPQRFPEGAQIEVLFTDDTHTGHTLIADIKGSEWPMGKTVTYKISSSSL
HHHHHHHHHHCCHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCC
NWTYTLDVTALADFTYTGGTQQYCVTSYRQNAQGEKEAAEWTAQYAEDGTTWTDTKPVWL
EEEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCCEEE
TAFTASGTGGEFAQPCDATVEAQTGISNDLHENALKAATAKGSETTPYNLSNNTGGNTVE
EEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC
NTANCYVVNAPGYYSLPLVYGNAIKNSATNASAYTSTVTGTNILNPFINHAGNGITDPYI
CCCCEEEEECCCCEEEEEEECCHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCEE
SGNGCTPAKAELVWQDAMNLVTDIKYNADSNGGNISFKVDRSSIRQGNAVIAIKDVSDAI
CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEECCCEE
LWSWHVWVTDEDINNVIEITNHQNVKYNFMPVNLGQCDGNTITYEERSCKVKFIAGDQSK
EEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC
EITIKQLANVIATGSNAPFYQWGRKDPLYPSNGMGNTTKIWYDKEGIPSTANPMKGTFSA
CEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
GNDCIKNCILNPNLMHNRYNGDYTYYNLWSADNKTTSANDNPVNKTIYDPCPVGFKLPAS
CHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
NAFTGFTTTGESVSSSTQVNGTWSSSEKGWYFYTNSEKTQSIFFPALGYRSYSTMRPGSI
CCCCCEECCCCCCCCCCEECEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
GTQGCFWSAHPVAKGNNYYLRTSSVDVQPTYMVDRGFGYALRPCQD
CCCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA