Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347853

Identifier: 29347853

GI number: 29347853

Start: 3059820

End: 3061067

Strand: Reverse

Name: 29347853

Synonym: BT_2443

Alternate gene names: NA

Gene position: 3061067-3059820 (Counterclockwise)

Preceding gene: 29347854

Following gene: 29347852

Centisome position: 48.9

GC content: 39.82

Gene sequence:

>1248_bases
ATGAATGATGTTTATGCTGAAGCGAAGTTGAACAAGCCTGACTTCCATACAGCATATACATTGAAGAAAGATGATGGAGG
TGCTATCGCTTTGGGTGAAGGAAGTACAGGAACAGTAACAGAAGTAACGGATCCTGAAGCTATTGCTACTACAGTAGTAG
AGTGGACAGTAACTCCGGCAGAAGCTTTGGCTCTTGTTAAAAAGTCGAAGACAGAGATGTTCGCTACTGTGACTTATGAA
TCAGTAGACGGAACTCGTGGAGATATCACAATTACGATGAAAGCAAGCATCGCAATGCCTAGTGGAGTAATTAAGAATGA
CCAGAAGATTACTGAAGCTTGGTCACCTGATAAGTCTTATGTAAAAGCTGATGTGAAAGAACCGGTTACTGTAGCAGTAA
CAGACTTCAAACTTGATCTGTTTGATGTATTTGAAGGTCGTAAGGTTGTTGTTTCTGACGTTACAGAAGCGAACTTCCCA
TCATTTACGAAGGATAAGTTGACTGCGAAGTTTATCTTCTCAGGAGCTAAGGATGTAACTATCGGAACTGATAAATACAC
ATTCACTGTAACAGCTAACGGTACTCAATTGAATGCTAGCAAGAATAGTGCTACTGCAACTAAGATTGCTACAATTGATG
CTGACGGTATTATTACTTACAATAAGGCTGACGAGAATGCACATGCATTGTTGAATAAGTCTGCTTACAACGTGGATCCG
TTCACTGTAGGTATTGAAATTGTGGTAACTAACGAATGCGATGAAATCTTACCGTTGACTGGTAACAAATTTGATGTGAA
GTTCTTGCGTCCTATCAATGTAGTTGACTTGAAGTCTGCCGAATTGCAGGATGCAACTACAGGAACTGCTAAGATCGACA
TGAGCAAGTTACTTGGTTTGACAGACTGGAGAGGTCAAGCGTTTGCTGTAGCGCCTATCGATTTCTATACTTATTATGGA
GTTACTGGTAGTGCAATTTCAATTGATAAGGATCAGATCATGACAACATTGAATGCAAGCGAAGCTGCACCAAAACTGTT
GAAGGACGTTGCACCTAACATGTCAATTAATTACACATGTGATCTTCAGAAAATAGGTGGTGACATAACGTATGGTGACC
TTGTTTATGCAAACGGTAAGTTTACTATAAATGCACCATTCAAACTGTTTATTCCTGTAACGGTTAAATATACGTTCGGT
GAAGTAACCAGCACAGTAACATTAACAATTACTCCGACTCACCAGTAA

Upstream 100 bases:

>100_bases
GATTGTTAAGGGTACAATTGACGGATTCGGTAAAGTATTCACTAAAGATACTTATTACTATGGTTGTGAGAACAATGTTG
CCAAATTGACTTACCTCAAC

Downstream 100 bases:

>100_bases
TTGATTGATCTCTCACGATAGCAATATCGACAAAGATAAGAAGGGTATCTTTTTCAAAAGAAGGATACCCTTCTTTAATA
AAGTTAATGCAGTATCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE
SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP
SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP
FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG
VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG
EVTSTVTLTITPTHQ

Sequences:

>Translated_415_residues
MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE
SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP
SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP
FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG
VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG
EVTSTVTLTITPTHQ
>Mature_415_residues
MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPAEALALVKKSKTEMFATVTYE
SVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSYVKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFP
SFTKDKLTAKFIFSGAKDVTIGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP
FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGLTDWRGQAFAVAPIDFYTYYG
VTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTCDLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFG
EVTSTVTLTITPTHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44809; Mature: 44809

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPA
CCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCHHHEEEEEEEEECHH
EALALVKKSKTEMFATVTYESVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSY
HHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCHHH
VKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFPSFTKDKLTAKFIFSGAKDVT
EEECCCCCEEEEEEEEEEEEEHHCCCCEEEEEECCCCCCCCCCHHHEEEEEEECCCCEEE
IGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP
ECCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCHHHEECCCCCCCCC
FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGL
EEEEEEEEEECCCCCEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEEHHHHCCC
TDWRGQAFAVAPIDFYTYYGVTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTC
CCCCCCEEEEEEEEEEEEECCCCCEEEECHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE
DLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFGEVTSTVTLTITPTHQ
EHHHCCCEEEECCEEEECCEEEEECCEEEEEEEEEEEEECCEEEEEEEEEEECCC
>Mature Secondary Structure
MNDVYAEAKLNKPDFHTAYTLKKDDGGAIALGEGSTGTVTEVTDPEAIATTVVEWTVTPA
CCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCHHHEEEEEEEEECHH
EALALVKKSKTEMFATVTYESVDGTRGDITITMKASIAMPSGVIKNDQKITEAWSPDKSY
HHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCHHH
VKADVKEPVTVAVTDFKLDLFDVFEGRKVVVSDVTEANFPSFTKDKLTAKFIFSGAKDVT
EEECCCCCEEEEEEEEEEEEEHHCCCCEEEEEECCCCCCCCCCHHHEEEEEEECCCCEEE
IGTDKYTFTVTANGTQLNASKNSATATKIATIDADGIITYNKADENAHALLNKSAYNVDP
ECCCEEEEEEEECCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCHHHEECCCCCCCCC
FTVGIEIVVTNECDEILPLTGNKFDVKFLRPINVVDLKSAELQDATTGTAKIDMSKLLGL
EEEEEEEEEECCCCCEECCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEEEHHHHCCC
TDWRGQAFAVAPIDFYTYYGVTGSAISIDKDQIMTTLNASEAAPKLLKDVAPNMSINYTC
CCCCCCEEEEEEEEEEEEECCCCCEEEECHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE
DLQKIGGDITYGDLVYANGKFTINAPFKLFIPVTVKYTFGEVTSTVTLTITPTHQ
EHHHCCCEEEECCEEEECCEEEEECCEEEEEEEEEEEEECCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA