| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347828
Identifier: 29347828
GI number: 29347828
Start: 3020097
End: 3020483
Strand: Reverse
Name: 29347828
Synonym: BT_2418
Alternate gene names: NA
Gene position: 3020483-3020097 (Counterclockwise)
Preceding gene: 29347829
Following gene: 29347827
Centisome position: 48.25
GC content: 39.28
Gene sequence:
>387_bases ATGAAAAAAGAAAAAATTCATTTGGAGTATTTGTTGAACGCAACATCTAAAAATATTCTTTGGGCAGCTATTAGCACACC GACCGGGCTGGAGGACTGGTTTGCTGATAAAGTAGTATCTGATGATAAAATCGTAGAATTCCATTGGGGGAAGACTGAAC AAAGAAATGCCGAGATTATTGCGATCCGTTCTTTCTCATTTATTCGCTTTCGTTGGCAGGATGACGAAAATGAACGCGAT TACTTTGAAATCAAAATGACTTATAATGAGCTGACAAGTGACTATGTATTAGAAATTACAGACTTCGCAGAGGCGGACGA AGTTGCTGACATGAAAGAATTGTGGGAGTCGCAAGTGGCGAAATTGAGAAGAACGTGTGGTTTTTAG
Upstream 100 bases:
>100_bases CCTTGAAAAGAAATAAGTTTTAAATAAAGTGTCTGATTTATGCCACATAATTAGAAAAAAGTATTTATCTTGGCACACGT AAAAACAATTCGAAATTGCT
Downstream 100 bases:
>100_bases TTAACTTTCAACTAAAAATTTTCTATGCTACTTTTTTTGTGCTAATTTTGCGTCTTAATTGCACGAACCTATTAAGATGC TACGCATAAAGAAATTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKKEKIHLEYLLNATSKNILWAAISTPTGLEDWFADKVVSDDKIVEFHWGKTEQRNAEIIAIRSFSFIRFRWQDDENERD YFEIKMTYNELTSDYVLEITDFAEADEVADMKELWESQVAKLRRTCGF
Sequences:
>Translated_128_residues MKKEKIHLEYLLNATSKNILWAAISTPTGLEDWFADKVVSDDKIVEFHWGKTEQRNAEIIAIRSFSFIRFRWQDDENERD YFEIKMTYNELTSDYVLEITDFAEADEVADMKELWESQVAKLRRTCGF >Mature_128_residues MKKEKIHLEYLLNATSKNILWAAISTPTGLEDWFADKVVSDDKIVEFHWGKTEQRNAEIIAIRSFSFIRFRWQDDENERD YFEIKMTYNELTSDYVLEITDFAEADEVADMKELWESQVAKLRRTCGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15225; Mature: 15225
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEKIHLEYLLNATSKNILWAAISTPTGLEDWFADKVVSDDKIVEFHWGKTEQRNAEII CCCCCEEHEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEE AIRSFSFIRFRWQDDENERDYFEIKMTYNELTSDYVLEITDFAEADEVADMKELWESQVA EEECEEEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH KLRRTCGF HHHHHHCC >Mature Secondary Structure MKKEKIHLEYLLNATSKNILWAAISTPTGLEDWFADKVVSDDKIVEFHWGKTEQRNAEII CCCCCEEHEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEE AIRSFSFIRFRWQDDENERDYFEIKMTYNELTSDYVLEITDFAEADEVADMKELWESQVA EEECEEEEEEEECCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH KLRRTCGF HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA