| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347764
Identifier: 29347764
GI number: 29347764
Start: 2932880
End: 2935057
Strand: Reverse
Name: 29347764
Synonym: BT_2354
Alternate gene names: NA
Gene position: 2935057-2932880 (Counterclockwise)
Preceding gene: 29347765
Following gene: 29347763
Centisome position: 46.88
GC content: 33.7
Gene sequence:
>2178_bases ATGAATGAGAAAATAAATATCAAAAAGTTAAAGTCATCATGGACAAAGTATGATATTGTCAAGTTGATAGATATAACAGC AGATAATGACTTGGAACCATACATTGTAGGTTTAAAGGCAATTGATACTCCTGTTCTAAAAGGATTTCTTGGCATTAATC ATTTGTCCGATGAATTACCTTCTTTTTGGAAAGAGATACAGAACTACCCTAAACAAGTTAGGCTATTTGCTTTTGTAGCA GCGGTATCTATGCATTATTCTTTGCTCAAATTATTAGCTCGATTTTCTTCAAAATCATCCATGACTGGCACTTACAAATA TGAACCTAATACAAAGGTTTCGACAAACCTAAGAAGTGCTTTGGTCTTGTCAGGTGCAGCTTTACAAAATTATAGAAGAG AAAAAGAAGTACCGTACACATTAGCTACCTTATTTGAAGATGGTAATGTAGGATTATTAGCTAAAGAATTATTCATAAAT AGGCTATGCGTTATTGGGTACAATGAGGCAGAGCTAGTAGCAGATCAAGAATTGTTTTGGGAAGCTTGTGACAAGTCATT TATTATTGATGCTTTATCCTTAGATAAGGAACAGTTTAAGAAATGGACTTTAGGTGAATCATTAGACCCTAAAAAAGACG TTTTTTCCATTAGTAATTTGAAGGTTTATTCTCGATTACCTATGCTTAGGGTTAACCAATGGATGAATGAATGGGATGAT ATAAATTTTAATTCAGAGGAATTGAGGAGAAAACCTAAACCGTACTTTTATACTTTTAGCATAGATGCTCGTCTTTTAAA ACGACTATCTGATGTTCATAGGAGGAATAGTGAAGATAGGACATCCATTCAAAGAAAAAAGAGCGATGCTCGTGTAAAGG AAATAACAAATTATATTGAAGGAGGGTTCCCATGGTCAACTTTGACTAGAGAACAGCAAAGAACAGTAGAGCATGCTAAA TTAAAAATGCCAGGATTGCTTCCTACTGCTATCATTATTAATATTCTTTCTCCTAATGAAAAAAGGAATGGGAAAATACT AGAAGCTAGAAATTGTCTCACAATAGATGACAGGTTGAAAGATCAAGATGCTTGGGAAAATGCTAAAGAAGTTCCTTTCC CAATATTAAATATTCCAGAAGGTGTATTTAGTGATGACTGGAATCCAGAACTTAAGCCTATAGAGATAATTGATGGACAG CATCGATTATGGGCATTTGAAGATAATCAAAATTTTAATGGTAACTATGAGTTGCCAGTAATAGCGTTTGATAATCTTGA TAGAGCTTGGCAGGCTTATCTTTTTTATACTATAAATATAAAACCAGTAAAAATAAATACGAGCTTAGGATTTGATTTGT ACCCTATGCTAAGAACACAAAGTTGGTTAGAAGCGTCGAAAGATGGAATTCTCGCTTATCGTGAAAGTCGGGCTCAGGAA TTAGTAGAAGCCTTGTGGGTATCACCACTGAGTGTTTGGCACAATCGCATAAATATGATTGGAGAAAGTGGAGGTCCCTC TATGTCTCAAGCAGCTTTTGTTAGAACTTTTATAAATTCTTTTTTTAGACAAACAAAAGGACTGTATTCATCTAATCTAG TAAAAACCGAGTTACAAGTTCTCAATTGGAATAGAGCACAGCAGGCAGCTTTTATTTTCTTGATATGGGAGAGTATAGAA AACTCTTTATCAAACAATAGTGATTTACATTGGGCTAATAAACTAAGAGAAATAAACCATTCAGATGAAATCGAGTATGA TCAAGCATTTGTGAGTAAAGAATCTTTTTTATCTAGAGATCAAGGGGTTCGTGCTGTCATGGTATATGCTAATGATTTTT TCTATACTTTAATGGATGAATCTATTTTCAATTTGAATGTATTTTTATGGGAGGCAGGCATAGATGACTTGTCTATTAAT GATGAATCACTTCAAATGGCAATACAGTTATTTAAGAGAAATGAGTTGTTTATGAATTATTTGCACCAGTTCGCTGAACT TGTTGTAAAAATAGATTGGAGAACGCCTAGTGCTCCTTTTGACAGAGAAGAAGACAGAAGAAATCAATTGATATATAAAG GTAGTGGAGGATATACGGAATTTCAAAAAGCTTTGAAAGCTGTTTTCGAAGCAGAAACAAGTGATTTATTGAAGGAAGTT GTATCAAAAATGAGTTAG
Upstream 100 bases:
>100_bases ATATTCAAGTGAAAGAATATATACATAGTAAAATGGGAAGATCAGATATTCATTCTATGGGAGTTAATGAACTAATCATA TCATATAAAAGACAATAATC
Downstream 100 bases:
>100_bases AGATGCCGATAAATAGATTAATTAATAATGCTGATATTGAAAAGGTTTCTGAAGGTCTCTTATCGGTAAAAAATAATTGT TTCATTAATAAGATGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MNEKINIKKLKSSWTKYDIVKLIDITADNDLEPYIVGLKAIDTPVLKGFLGINHLSDELPSFWKEIQNYPKQVRLFAFVA AVSMHYSLLKLLARFSSKSSMTGTYKYEPNTKVSTNLRSALVLSGAALQNYRREKEVPYTLATLFEDGNVGLLAKELFIN RLCVIGYNEAELVADQELFWEACDKSFIIDALSLDKEQFKKWTLGESLDPKKDVFSISNLKVYSRLPMLRVNQWMNEWDD INFNSEELRRKPKPYFYTFSIDARLLKRLSDVHRRNSEDRTSIQRKKSDARVKEITNYIEGGFPWSTLTREQQRTVEHAK LKMPGLLPTAIIINILSPNEKRNGKILEARNCLTIDDRLKDQDAWENAKEVPFPILNIPEGVFSDDWNPELKPIEIIDGQ HRLWAFEDNQNFNGNYELPVIAFDNLDRAWQAYLFYTINIKPVKINTSLGFDLYPMLRTQSWLEASKDGILAYRESRAQE LVEALWVSPLSVWHNRINMIGESGGPSMSQAAFVRTFINSFFRQTKGLYSSNLVKTELQVLNWNRAQQAAFIFLIWESIE NSLSNNSDLHWANKLREINHSDEIEYDQAFVSKESFLSRDQGVRAVMVYANDFFYTLMDESIFNLNVFLWEAGIDDLSIN DESLQMAIQLFKRNELFMNYLHQFAELVVKIDWRTPSAPFDREEDRRNQLIYKGSGGYTEFQKALKAVFEAETSDLLKEV VSKMS
Sequences:
>Translated_725_residues MNEKINIKKLKSSWTKYDIVKLIDITADNDLEPYIVGLKAIDTPVLKGFLGINHLSDELPSFWKEIQNYPKQVRLFAFVA AVSMHYSLLKLLARFSSKSSMTGTYKYEPNTKVSTNLRSALVLSGAALQNYRREKEVPYTLATLFEDGNVGLLAKELFIN RLCVIGYNEAELVADQELFWEACDKSFIIDALSLDKEQFKKWTLGESLDPKKDVFSISNLKVYSRLPMLRVNQWMNEWDD INFNSEELRRKPKPYFYTFSIDARLLKRLSDVHRRNSEDRTSIQRKKSDARVKEITNYIEGGFPWSTLTREQQRTVEHAK LKMPGLLPTAIIINILSPNEKRNGKILEARNCLTIDDRLKDQDAWENAKEVPFPILNIPEGVFSDDWNPELKPIEIIDGQ HRLWAFEDNQNFNGNYELPVIAFDNLDRAWQAYLFYTINIKPVKINTSLGFDLYPMLRTQSWLEASKDGILAYRESRAQE LVEALWVSPLSVWHNRINMIGESGGPSMSQAAFVRTFINSFFRQTKGLYSSNLVKTELQVLNWNRAQQAAFIFLIWESIE NSLSNNSDLHWANKLREINHSDEIEYDQAFVSKESFLSRDQGVRAVMVYANDFFYTLMDESIFNLNVFLWEAGIDDLSIN DESLQMAIQLFKRNELFMNYLHQFAELVVKIDWRTPSAPFDREEDRRNQLIYKGSGGYTEFQKALKAVFEAETSDLLKEV VSKMS >Mature_725_residues MNEKINIKKLKSSWTKYDIVKLIDITADNDLEPYIVGLKAIDTPVLKGFLGINHLSDELPSFWKEIQNYPKQVRLFAFVA AVSMHYSLLKLLARFSSKSSMTGTYKYEPNTKVSTNLRSALVLSGAALQNYRREKEVPYTLATLFEDGNVGLLAKELFIN RLCVIGYNEAELVADQELFWEACDKSFIIDALSLDKEQFKKWTLGESLDPKKDVFSISNLKVYSRLPMLRVNQWMNEWDD INFNSEELRRKPKPYFYTFSIDARLLKRLSDVHRRNSEDRTSIQRKKSDARVKEITNYIEGGFPWSTLTREQQRTVEHAK LKMPGLLPTAIIINILSPNEKRNGKILEARNCLTIDDRLKDQDAWENAKEVPFPILNIPEGVFSDDWNPELKPIEIIDGQ HRLWAFEDNQNFNGNYELPVIAFDNLDRAWQAYLFYTINIKPVKINTSLGFDLYPMLRTQSWLEASKDGILAYRESRAQE LVEALWVSPLSVWHNRINMIGESGGPSMSQAAFVRTFINSFFRQTKGLYSSNLVKTELQVLNWNRAQQAAFIFLIWESIE NSLSNNSDLHWANKLREINHSDEIEYDQAFVSKESFLSRDQGVRAVMVYANDFFYTLMDESIFNLNVFLWEAGIDDLSIN DESLQMAIQLFKRNELFMNYLHQFAELVVKIDWRTPSAPFDREEDRRNQLIYKGSGGYTEFQKALKAVFEAETSDLLKEV VSKMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84141; Mature: 84141
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKINIKKLKSSWTKYDIVKLIDITADNDLEPYIVGLKAIDTPVLKGFLGINHLSDELP CCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH SFWKEIQNYPKQVRLFAFVAAVSMHYSLLKLLARFSSKSSMTGTYKYEPNTKVSTNLRSA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH LVLSGAALQNYRREKEVPYTLATLFEDGNVGLLAKELFINRLCVIGYNEAELVADQELFW HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHH EACDKSFIIDALSLDKEQFKKWTLGESLDPKKDVFSISNLKVYSRLPMLRVNQWMNEWDD HHCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHEECCCHHHHHCCHHHHHHHHHHHCC INFNSEELRRKPKPYFYTFSIDARLLKRLSDVHRRNSEDRTSIQRKKSDARVKEITNYIE CCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GGFPWSTLTREQQRTVEHAKLKMPGLLPTAIIINILSPNEKRNGKILEARNCLTIDDRLK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCEEECCCCEEEHHHCC DQDAWENAKEVPFPILNIPEGVFSDDWNPELKPIEIIDGQHRLWAFEDNQNFNGNYELPV CCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEE IAFDNLDRAWQAYLFYTINIKPVKINTSLGFDLYPMLRTQSWLEASKDGILAYRESRAQE EEECCCCHHEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHH LVEALWVSPLSVWHNRINMIGESGGPSMSQAAFVRTFINSFFRQTKGLYSSNLVKTELQV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH LNWNRAQQAAFIFLIWESIENSLSNNSDLHWANKLREINHSDEIEYDQAFVSKESFLSRD HCCCCHHHHEEEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC QGVRAVMVYANDFFYTLMDESIFNLNVFLWEAGIDDLSINDESLQMAIQLFKRNELFMNY CCCEEEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LHQFAELVVKIDWRTPSAPFDREEDRRNQLIYKGSGGYTEFQKALKAVFEAETSDLLKEV HHHHHHHEEEEECCCCCCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VSKMS HHHCC >Mature Secondary Structure MNEKINIKKLKSSWTKYDIVKLIDITADNDLEPYIVGLKAIDTPVLKGFLGINHLSDELP CCCCCCHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH SFWKEIQNYPKQVRLFAFVAAVSMHYSLLKLLARFSSKSSMTGTYKYEPNTKVSTNLRSA HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH LVLSGAALQNYRREKEVPYTLATLFEDGNVGLLAKELFINRLCVIGYNEAELVADQELFW HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHH EACDKSFIIDALSLDKEQFKKWTLGESLDPKKDVFSISNLKVYSRLPMLRVNQWMNEWDD HHCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHEECCCHHHHHCCHHHHHHHHHHHCC INFNSEELRRKPKPYFYTFSIDARLLKRLSDVHRRNSEDRTSIQRKKSDARVKEITNYIE CCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GGFPWSTLTREQQRTVEHAKLKMPGLLPTAIIINILSPNEKRNGKILEARNCLTIDDRLK CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCEEECCCCEEEHHHCC DQDAWENAKEVPFPILNIPEGVFSDDWNPELKPIEIIDGQHRLWAFEDNQNFNGNYELPV CCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEE IAFDNLDRAWQAYLFYTINIKPVKINTSLGFDLYPMLRTQSWLEASKDGILAYRESRAQE EEECCCCHHEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHH LVEALWVSPLSVWHNRINMIGESGGPSMSQAAFVRTFINSFFRQTKGLYSSNLVKTELQV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH LNWNRAQQAAFIFLIWESIENSLSNNSDLHWANKLREINHSDEIEYDQAFVSKESFLSRD HCCCCHHHHEEEEEEEHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC QGVRAVMVYANDFFYTLMDESIFNLNVFLWEAGIDDLSINDESLQMAIQLFKRNELFMNY CCCEEEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LHQFAELVVKIDWRTPSAPFDREEDRRNQLIYKGSGGYTEFQKALKAVFEAETSDLLKEV HHHHHHHEEEEECCCCCCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH VSKMS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA