| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347763
Identifier: 29347763
GI number: 29347763
Start: 2931543
End: 2932877
Strand: Reverse
Name: 29347763
Synonym: BT_2353
Alternate gene names: NA
Gene position: 2932877-2931543 (Counterclockwise)
Preceding gene: 29347764
Following gene: 29347754
Centisome position: 46.85
GC content: 31.31
Gene sequence:
>1335_bases ATGCCGATAAATAGATTAATTAATAATGCTGATATTGAAAAGGTTTCTGAAGGTCTCTTATCGGTAAAAAATAATTGTTT CATTAATAAGATGCTTCTGTCACCAACAAATCCATTATTATGTAATAATCCTGGAGGAATAATAAAAAATCAAGTGGGTT TATCTGCTGATTCGTTAAAAGAATATATGTCTGTTTGTACGTTTGTGCATACAATTGATGGTTGGTCTTATTTAAGTAAT GCGATTAATGCTTTTTTAAATGGTGAGCCTTCAATAACAGTACATCTATCATATTATGCAGAACTAAGGGCTGCTATGGC TTTCTTATGTACAGAAGGGATACTGATAGCAAACAATGAGCAAGCGTGTATAGATAGTTCTAATAATATATATATACCTA GTTGTCAGCCAAAAAGTATGCGAATAACTCGAACAGGAACACACTCTGCGACATGGGATATTATTAATGAATGGATATTA AATAGTACAAAACAGACGAATGTACTTGAATATTTTACATATAAAGGACGTACTTTCAAAGAACTAATATCATTTATTCC TCATGCTGCAAATACTAATTCGGGGCAAGTTGCTCTTGTGAAAAAATGGTTGCAAACATGGTGCTTTGATATTAGAAAAT ATGAAGAAGATCGAGAGGGGCGGAATACTTCATCTTATAATGCCAATATTGCTCGAAATTTCACTCCTAATAATCTGCGA GATAGTTTATCTATATTGAACGAATTTTGGTTACTTTTGGAACCATCAGCTGATAATTTCTCTAAATTAGATCAATATCT TTTTGCTTTATATTTAAAGGAAGTTTATAATAATGCAGTTTTAAATGGTTTTTCTATCACTAAAGATGATTTTATCAAAG GGCTATATAATAATAGTGGTTTGACTGAAGATCTATTTTTATCTAGAGTTTTTATAAATGATGAAGAAAGTTCGTTACTT AAATATGCAAAAGATCATCAAATTGATCCTGGAACAGGAGAAGTTCATTCACTAACAATTATAGCCCGAGCTATTCTTTT ACTTCGATTTTGTTGTGGTGCATGCTCTTTCTTATTTAAGAAAAACAGCATATCAAAAAATGATTTGGATTTTTATATAC ATAAGGTAGGTCAAAGTTATGGGATATGGGATACTGTAAATCCTGAGGATCTCAGGGACCTATGGACGGACATAAATGAT TTACTGATTGATTTTGAACAATATTTTGAAGCCAATACTCCATCAAATATATATAATTTAAAGACTACATTTACTGGATA TTCAGAAGTATACACACAATTCTCAAGAGCTGGACTTTGGGGCTTGGGATTATGA
Upstream 100 bases:
>100_bases GTAGTGGAGGATATACGGAATTTCAAAAAGCTTTGAAAGCTGTTTTCGAAGCAGAAACAAGTGATTTATTGAAGGAAGTT GTATCAAAAATGAGTTAGAG
Downstream 100 bases:
>100_bases GTAAAATTACAATTTATTTATTGTTAAGTGAGTGGGTATTGTTAGTTTATATTGAGAATTTTTATGAATTTAATTCTGAA ATTGTACAGAGTCAAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MPINRLINNADIEKVSEGLLSVKNNCFINKMLLSPTNPLLCNNPGGIIKNQVGLSADSLKEYMSVCTFVHTIDGWSYLSN AINAFLNGEPSITVHLSYYAELRAAMAFLCTEGILIANNEQACIDSSNNIYIPSCQPKSMRITRTGTHSATWDIINEWIL NSTKQTNVLEYFTYKGRTFKELISFIPHAANTNSGQVALVKKWLQTWCFDIRKYEEDREGRNTSSYNANIARNFTPNNLR DSLSILNEFWLLLEPSADNFSKLDQYLFALYLKEVYNNAVLNGFSITKDDFIKGLYNNSGLTEDLFLSRVFINDEESSLL KYAKDHQIDPGTGEVHSLTIIARAILLLRFCCGACSFLFKKNSISKNDLDFYIHKVGQSYGIWDTVNPEDLRDLWTDIND LLIDFEQYFEANTPSNIYNLKTTFTGYSEVYTQFSRAGLWGLGL
Sequences:
>Translated_444_residues MPINRLINNADIEKVSEGLLSVKNNCFINKMLLSPTNPLLCNNPGGIIKNQVGLSADSLKEYMSVCTFVHTIDGWSYLSN AINAFLNGEPSITVHLSYYAELRAAMAFLCTEGILIANNEQACIDSSNNIYIPSCQPKSMRITRTGTHSATWDIINEWIL NSTKQTNVLEYFTYKGRTFKELISFIPHAANTNSGQVALVKKWLQTWCFDIRKYEEDREGRNTSSYNANIARNFTPNNLR DSLSILNEFWLLLEPSADNFSKLDQYLFALYLKEVYNNAVLNGFSITKDDFIKGLYNNSGLTEDLFLSRVFINDEESSLL KYAKDHQIDPGTGEVHSLTIIARAILLLRFCCGACSFLFKKNSISKNDLDFYIHKVGQSYGIWDTVNPEDLRDLWTDIND LLIDFEQYFEANTPSNIYNLKTTFTGYSEVYTQFSRAGLWGLGL >Mature_443_residues PINRLINNADIEKVSEGLLSVKNNCFINKMLLSPTNPLLCNNPGGIIKNQVGLSADSLKEYMSVCTFVHTIDGWSYLSNA INAFLNGEPSITVHLSYYAELRAAMAFLCTEGILIANNEQACIDSSNNIYIPSCQPKSMRITRTGTHSATWDIINEWILN STKQTNVLEYFTYKGRTFKELISFIPHAANTNSGQVALVKKWLQTWCFDIRKYEEDREGRNTSSYNANIARNFTPNNLRD SLSILNEFWLLLEPSADNFSKLDQYLFALYLKEVYNNAVLNGFSITKDDFIKGLYNNSGLTEDLFLSRVFINDEESSLLK YAKDHQIDPGTGEVHSLTIIARAILLLRFCCGACSFLFKKNSISKNDLDFYIHKVGQSYGIWDTVNPEDLRDLWTDINDL LIDFEQYFEANTPSNIYNLKTTFTGYSEVYTQFSRAGLWGLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50441; Mature: 50309
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINRLINNADIEKVSEGLLSVKNNCFINKMLLSPTNPLLCNNPGGIIKNQVGLSADSLK CCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHH EYMSVCTFVHTIDGWSYLSNAINAFLNGEPSITVHLSYYAELRAAMAFLCTEGILIANNE HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCC QACIDSSNNIYIPSCQPKSMRITRTGTHSATWDIINEWILNSTKQTNVLEYFTYKGRTFK CCEEECCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHH ELISFIPHAANTNSGQVALVKKWLQTWCFDIRKYEEDREGRNTSSYNANIARNFTPNNLR HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHH DSLSILNEFWLLLEPSADNFSKLDQYLFALYLKEVYNNAVLNGFSITKDDFIKGLYNNSG HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCC LTEDLFLSRVFINDEESSLLKYAKDHQIDPGTGEVHSLTIIARAILLLRFCCGACSFLFK CCHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KNSISKNDLDFYIHKVGQSYGIWDTVNPEDLRDLWTDINDLLIDFEQYFEANTPSNIYNL CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE KTTFTGYSEVYTQFSRAGLWGLGL EEECCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PINRLINNADIEKVSEGLLSVKNNCFINKMLLSPTNPLLCNNPGGIIKNQVGLSADSLK CHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHH EYMSVCTFVHTIDGWSYLSNAINAFLNGEPSITVHLSYYAELRAAMAFLCTEGILIANNE HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCC QACIDSSNNIYIPSCQPKSMRITRTGTHSATWDIINEWILNSTKQTNVLEYFTYKGRTFK CCEEECCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHH ELISFIPHAANTNSGQVALVKKWLQTWCFDIRKYEEDREGRNTSSYNANIARNFTPNNLR HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHH DSLSILNEFWLLLEPSADNFSKLDQYLFALYLKEVYNNAVLNGFSITKDDFIKGLYNNSG HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCC LTEDLFLSRVFINDEESSLLKYAKDHQIDPGTGEVHSLTIIARAILLLRFCCGACSFLFK CCHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KNSISKNDLDFYIHKVGQSYGIWDTVNPEDLRDLWTDINDLLIDFEQYFEANTPSNIYNL CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE KTTFTGYSEVYTQFSRAGLWGLGL EEECCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA