| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347729
Identifier: 29347729
GI number: 29347729
Start: 2894828
End: 2896120
Strand: Reverse
Name: 29347729
Synonym: BT_2319
Alternate gene names: NA
Gene position: 2896120-2894828 (Counterclockwise)
Preceding gene: 29347731
Following gene: 29347728
Centisome position: 46.26
GC content: 56.23
Gene sequence:
>1293_bases ATGGAATTGAAGAAGTTTTTTGTTTTGGTCCTGCTCTTGGGAAGTGTCTGTCCGGCTTTCTGTGGTGGTGACACCTTGCA TTGCCGGTTCTATTTCCCCGTCGGCAGTGCCATTCCGGATCTTTCCTACCGGGACAATGGCCCTCGTCTGGACTCCTTTC TTTCGAGCATCCGCTCCCTGCAGGAACGTGCCGTACTGCGCCGTGTACGCTTGCGTTCCGGCGCTTCCCCTGAAGGGAAT TCCATGTTGAACAGACGCCTGTCCGATGAACGGCTCGTGTCTCTGCGTGCCGTCATGCGGGAACGTCTTTCCGTCCCCGA TTCGGTGCTTGTCTGCCTCTCCTCGGGAGAAGACTGGGAGGGCCTCTCCGTCCTTGTCGGGGAGTCTGACATGCCCTGCC GTGACGAGGTCCTCCGTATTCTTCGTGATACTCCCGTGTGGGTGGTTCGGGGCGGTAAAGTGGTTGATTCCCGCAAGCGA CAGCTGATGAATCTGCGTGGCGGGAGCGTGTGGCGTTATATGGCCGAACATTTTTTTCCCGAACTCCGTAACTGTACCGT GGTCGAATGTGAGTTTGGACCCGTAATTTCCGGAAATGACCGGGAAATCGCCGTTTATCAGAAAGAGGCGGAAGCACGGG ATACGGTCATCCTTCGTGACACTGTCGAAAGAACCGTTGTTATTCGTGACACGGTACAGGTGCCCGCTTCCGTTGGCAAT GCCCTCAAGCCTTTTTACATGGGTCTGAAAACCAATCTGCTCTACGATGCCCTTCTTGTTCCGAATCTTGGTGTGGAGTT TTACCTCGGCAGAGGCTGGTCGTTCGGCGGCAACTGGATGTATGCCTGGTGGAAGAGCGACAGGCACCATAACTACTGGC GGATATACGGGGGTGAATTGGCCCTCCGTAAATACTTCGGGCGCCGTGCCGCAGAGAAACCGCTTGCCGGGCATCACCTC GGACTTTACGGCCAGCTGTTCACCTACGACTTCGAGGTCGGGGGGACGGGTTACATGGGCGGCAGGCCGGGTGGTACGCT TTGGGAGAAGATGAACTATGCCGTGGGACTGGAATACGGCTACTCGCTGCCCATCGCTCGTCGCCTGAACCTGGATTTTG TCATCGGCGTGGGCTACTGGGGTGGTGAATACCATAAATACGACCCCGTTGACGGTTGCTATGTCTGGAAAGAGACCCTG CAGCGTCACTGGTTCGGTCCCACGAAAGCGGAGGTTTCGCTCGTGTGGCTTTTGGGAAGAGGCAACCATAACGAGAAAGG AGGCAAGCAATGA
Upstream 100 bases:
>100_bases TTTCCACTCTCTGTCATGGAGAGTGGAAAAATATATTTTTTAATGATTAATGTTTTAACTCGTTTTGCTATATGTAAGTA TGTTGAATAAATTATATTTT
Downstream 100 bases:
>100_bases ACAAGATGAATCTAATCTTACAGGCTGTCACTGTATTTGCAAGTCTGTTATTAATATCCTGCGAACATAAGGATTTGTGC TACGACCATTCCCATACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MELKKFFVLVLLLGSVCPAFCGGDTLHCRFYFPVGSAIPDLSYRDNGPRLDSFLSSIRSLQERAVLRRVRLRSGASPEGN SMLNRRLSDERLVSLRAVMRERLSVPDSVLVCLSSGEDWEGLSVLVGESDMPCRDEVLRILRDTPVWVVRGGKVVDSRKR QLMNLRGGSVWRYMAEHFFPELRNCTVVECEFGPVISGNDREIAVYQKEAEARDTVILRDTVERTVVIRDTVQVPASVGN ALKPFYMGLKTNLLYDALLVPNLGVEFYLGRGWSFGGNWMYAWWKSDRHHNYWRIYGGELALRKYFGRRAAEKPLAGHHL GLYGQLFTYDFEVGGTGYMGGRPGGTLWEKMNYAVGLEYGYSLPIARRLNLDFVIGVGYWGGEYHKYDPVDGCYVWKETL QRHWFGPTKAEVSLVWLLGRGNHNEKGGKQ
Sequences:
>Translated_430_residues MELKKFFVLVLLLGSVCPAFCGGDTLHCRFYFPVGSAIPDLSYRDNGPRLDSFLSSIRSLQERAVLRRVRLRSGASPEGN SMLNRRLSDERLVSLRAVMRERLSVPDSVLVCLSSGEDWEGLSVLVGESDMPCRDEVLRILRDTPVWVVRGGKVVDSRKR QLMNLRGGSVWRYMAEHFFPELRNCTVVECEFGPVISGNDREIAVYQKEAEARDTVILRDTVERTVVIRDTVQVPASVGN ALKPFYMGLKTNLLYDALLVPNLGVEFYLGRGWSFGGNWMYAWWKSDRHHNYWRIYGGELALRKYFGRRAAEKPLAGHHL GLYGQLFTYDFEVGGTGYMGGRPGGTLWEKMNYAVGLEYGYSLPIARRLNLDFVIGVGYWGGEYHKYDPVDGCYVWKETL QRHWFGPTKAEVSLVWLLGRGNHNEKGGKQ >Mature_430_residues MELKKFFVLVLLLGSVCPAFCGGDTLHCRFYFPVGSAIPDLSYRDNGPRLDSFLSSIRSLQERAVLRRVRLRSGASPEGN SMLNRRLSDERLVSLRAVMRERLSVPDSVLVCLSSGEDWEGLSVLVGESDMPCRDEVLRILRDTPVWVVRGGKVVDSRKR QLMNLRGGSVWRYMAEHFFPELRNCTVVECEFGPVISGNDREIAVYQKEAEARDTVILRDTVERTVVIRDTVQVPASVGN ALKPFYMGLKTNLLYDALLVPNLGVEFYLGRGWSFGGNWMYAWWKSDRHHNYWRIYGGELALRKYFGRRAAEKPLAGHHL GLYGQLFTYDFEVGGTGYMGGRPGGTLWEKMNYAVGLEYGYSLPIARRLNLDFVIGVGYWGGEYHKYDPVDGCYVWKETL QRHWFGPTKAEVSLVWLLGRGNHNEKGGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48890; Mature: 48890
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKKFFVLVLLLGSVCPAFCGGDTLHCRFYFPVGSAIPDLSYRDNGPRLDSFLSSIRSL CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH QERAVLRRVRLRSGASPEGNSMLNRRLSDERLVSLRAVMRERLSVPDSVLVCLSSGEDWE HHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC GLSVLVGESDMPCRDEVLRILRDTPVWVVRGGKVVDSRKRQLMNLRGGSVWRYMAEHFFP CEEEEECCCCCCHHHHHHHHHHCCCEEEEECCEEHHHHHHHHHHCCCCHHHHHHHHHHHH ELRNCTVVECEFGPVISGNDREIAVYQKEAEARDTVILRDTVERTVVIRDTVQVPASVGN HHCCCEEEEEECCCEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCHHHCC ALKPFYMGLKTNLLYDALLVPNLGVEFYLGRGWSFGGNWMYAWWKSDRHHNYWRIYGGEL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCHH ALRKYFGRRAAEKPLAGHHLGLYGQLFTYDFEVGGTGYMGGRPGGTLWEKMNYAVGLEYG HHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCC YSLPIARRLNLDFVIGVGYWGGEYHKYDPVDGCYVWKETLQRHWFGPTKAEVSLVWLLGR CCCCEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEC GNHNEKGGKQ CCCCCCCCCC >Mature Secondary Structure MELKKFFVLVLLLGSVCPAFCGGDTLHCRFYFPVGSAIPDLSYRDNGPRLDSFLSSIRSL CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH QERAVLRRVRLRSGASPEGNSMLNRRLSDERLVSLRAVMRERLSVPDSVLVCLSSGEDWE HHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC GLSVLVGESDMPCRDEVLRILRDTPVWVVRGGKVVDSRKRQLMNLRGGSVWRYMAEHFFP CEEEEECCCCCCHHHHHHHHHHCCCEEEEECCEEHHHHHHHHHHCCCCHHHHHHHHHHHH ELRNCTVVECEFGPVISGNDREIAVYQKEAEARDTVILRDTVERTVVIRDTVQVPASVGN HHCCCEEEEEECCCEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCHHHCC ALKPFYMGLKTNLLYDALLVPNLGVEFYLGRGWSFGGNWMYAWWKSDRHHNYWRIYGGEL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCHH ALRKYFGRRAAEKPLAGHHLGLYGQLFTYDFEVGGTGYMGGRPGGTLWEKMNYAVGLEYG HHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCC YSLPIARRLNLDFVIGVGYWGGEYHKYDPVDGCYVWKETLQRHWFGPTKAEVSLVWLLGR CCCCEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEC GNHNEKGGKQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA