| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347728
Identifier: 29347728
GI number: 29347728
Start: 2893890
End: 2894822
Strand: Reverse
Name: 29347728
Synonym: BT_2318
Alternate gene names: NA
Gene position: 2894822-2893890 (Counterclockwise)
Preceding gene: 29347729
Following gene: 29347727
Centisome position: 46.24
GC content: 54.98
Gene sequence:
>933_bases ATGAATCTAATCTTACAGGCTGTCACTGTATTTGCAAGTCTGTTATTAATATCCTGCGAACATAAGGATTTGTGCTACGA CCATTCCCATACCTATAGAGTACAGGTGGTTTTCGACTGGCGTAACACTCCCGGCGCGAGCCCTGAAACCATGCGCCTTT ATCTGTTCCCTGTCGATGGGGGTACCTCCCAGGCCTACGAGTTCACCGATTACCGGGGAGGTTACATTAACGTGCCTGCG GGAGGTTATAGGGCGTTGTGTGTCAACTCGGACACGGAGTCCGTGCTTTACCGGAACACCGACTCGTTCGACGGCCTTGA GGCCTATGCCCCCGAAGGTGTCCTGAACGTGGGGGGCTCTCCGGCTCCCCGTGCGGAAGGCACCTCGGGAGAGCGTATCG CCGGGTCTCCGGACCGTCTTTACAGCGACCGTCTTTACGACCTTGTGATTGAACCCTCCAAAGAGAGCCAAACGGTAACC CTCTATCCCGCACTCTCCGTATGCCGTTACCGGGTTACGATTACGAATGTGTCCAATCTAAAATATATTTCTCCTGACGG TGTCTCCGGTGCCCTTACCGGTATGTCCGGAGGAATGCTTGTCGGTCGCAACGAACTTACGTCCGATCCCGTGACCGTAC CTTTCGGGGTTGTTTCCGACGGTACCTCCACCCTGACGGCCGACTTTCTGGTTTTCGGGCAGACCGGTCCGGAAGATTCT GTACACAAGTTGGTCATCTACGTGATCATGTCTGACGGAAGTAGGAATTACTACACGTTTGACGTGACCCGGCAGGTTGA CGGTGCCCCCGATCCCCGTGATGTCCATATCATGCTGGACGGCCTTCCCCTGCCCAAGCCCATTGTTAACGGCGGAGGCT TTCATCCCACGGTTGACGAGTGGCAGAACGTTGACGTGGATGTTCCCATGTGA
Upstream 100 bases:
>100_bases TGCAGCGTCACTGGTTCGGTCCCACGAAAGCGGAGGTTTCGCTCGTGTGGCTTTTGGGAAGAGGCAACCATAACGAGAAA GGAGGCAAGCAATGAACAAG
Downstream 100 bases:
>100_bases TTTGCGGACCGTGCTCTCCATGCCTCACGATACGGAGGTAAAGAATGAATAGTTTATCTGTTTAATATATTTTTAATTTT AATGTTTTACTGTATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNLILQAVTVFASLLLISCEHKDLCYDHSHTYRVQVVFDWRNTPGASPETMRLYLFPVDGGTSQAYEFTDYRGGYINVPA GGYRALCVNSDTESVLYRNTDSFDGLEAYAPEGVLNVGGSPAPRAEGTSGERIAGSPDRLYSDRLYDLVIEPSKESQTVT LYPALSVCRYRVTITNVSNLKYISPDGVSGALTGMSGGMLVGRNELTSDPVTVPFGVVSDGTSTLTADFLVFGQTGPEDS VHKLVIYVIMSDGSRNYYTFDVTRQVDGAPDPRDVHIMLDGLPLPKPIVNGGGFHPTVDEWQNVDVDVPM
Sequences:
>Translated_310_residues MNLILQAVTVFASLLLISCEHKDLCYDHSHTYRVQVVFDWRNTPGASPETMRLYLFPVDGGTSQAYEFTDYRGGYINVPA GGYRALCVNSDTESVLYRNTDSFDGLEAYAPEGVLNVGGSPAPRAEGTSGERIAGSPDRLYSDRLYDLVIEPSKESQTVT LYPALSVCRYRVTITNVSNLKYISPDGVSGALTGMSGGMLVGRNELTSDPVTVPFGVVSDGTSTLTADFLVFGQTGPEDS VHKLVIYVIMSDGSRNYYTFDVTRQVDGAPDPRDVHIMLDGLPLPKPIVNGGGFHPTVDEWQNVDVDVPM >Mature_310_residues MNLILQAVTVFASLLLISCEHKDLCYDHSHTYRVQVVFDWRNTPGASPETMRLYLFPVDGGTSQAYEFTDYRGGYINVPA GGYRALCVNSDTESVLYRNTDSFDGLEAYAPEGVLNVGGSPAPRAEGTSGERIAGSPDRLYSDRLYDLVIEPSKESQTVT LYPALSVCRYRVTITNVSNLKYISPDGVSGALTGMSGGMLVGRNELTSDPVTVPFGVVSDGTSTLTADFLVFGQTGPEDS VHKLVIYVIMSDGSRNYYTFDVTRQVDGAPDPRDVHIMLDGLPLPKPIVNGGGFHPTVDEWQNVDVDVPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33742; Mature: 33742
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLILQAVTVFASLLLISCEHKDLCYDHSHTYRVQVVFDWRNTPGASPETMRLYLFPVDG CCHHHHHHHHHHHHHEEECCCCCCEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECC GTSQAYEFTDYRGGYINVPAGGYRALCVNSDTESVLYRNTDSFDGLEAYAPEGVLNVGGS CCCCEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCCCCHHCCCCCEEECCCC PAPRAEGTSGERIAGSPDRLYSDRLYDLVIEPSKESQTVTLYPALSVCRYRVTITNVSNL CCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEECCEEEEEEEEEEECCCE KYISPDGVSGALTGMSGGMLVGRNELTSDPVTVPFGVVSDGTSTLTADFLVFGQTGPEDS EEECCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCC VHKLVIYVIMSDGSRNYYTFDVTRQVDGAPDPRDVHIMLDGLPLPKPIVNGGGFHPTVDE CEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCHH WQNVDVDVPM HCCCEEECCC >Mature Secondary Structure MNLILQAVTVFASLLLISCEHKDLCYDHSHTYRVQVVFDWRNTPGASPETMRLYLFPVDG CCHHHHHHHHHHHHHEEECCCCCCEECCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECC GTSQAYEFTDYRGGYINVPAGGYRALCVNSDTESVLYRNTDSFDGLEAYAPEGVLNVGGS CCCCEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCCCCHHCCCCCEEECCCC PAPRAEGTSGERIAGSPDRLYSDRLYDLVIEPSKESQTVTLYPALSVCRYRVTITNVSNL CCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEECCEEEEEEEEEEECCCE KYISPDGVSGALTGMSGGMLVGRNELTSDPVTVPFGVVSDGTSTLTADFLVFGQTGPEDS EEECCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCC VHKLVIYVIMSDGSRNYYTFDVTRQVDGAPDPRDVHIMLDGLPLPKPIVNGGGFHPTVDE CEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCHH WQNVDVDVPM HCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA