Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347727

Identifier: 29347727

GI number: 29347727

Start: 2892648

End: 2893808

Strand: Reverse

Name: 29347727

Synonym: BT_2317

Alternate gene names: NA

Gene position: 2893808-2892648 (Counterclockwise)

Preceding gene: 29347728

Following gene: 29347726

Centisome position: 46.22

GC content: 51.59

Gene sequence:

>1161_bases
ATGTTTTACTGTATGAAAAAGAATCTTTTATTCGCAGCTATGGCTGTAACAGCGTTGGCCTCTTGTTCCAACGATGATGT
CGTTGACGTGAACAATGGCGGTGGCATTTCCTTCCGTGCTTCTTTGGACAGGGCCGTTACCCGTACCAATGTAACAAGCC
TGCAGAATCTGGCGGCATTCAATGTGACCGCCATCGGTGATGGCAAGAATTATTTCACGGACCTGGGTGTCAGTTCTGCT
GATAACGGTGTAAACTGGACAACCGCTTCCACTTACTACTGGCCGGGTTATGAGCTTGCCTTCTTCGCCTATGCTCCCCA
AGCTCCCGCCGGCACAGTGAGTATAGACAATGCGTCAAAGAAGATAACCGGTTTCTCTCCCGCACAGGCCGTTGCAGATC
AAAAGGATCTTGTGATCTCTTACAATACGGGAACTAAGGCTGTCAACGAGGGTCCCGGTGTTGCCATGAACTTCAAGCAC
GCCCTCTCCCAGATCGAGGTCAAGGCCAAATGTTCCAATGACAAGATAAAGATTGAGATCATGGGCGTTAAACTGGTGAA
TGCCGCCGCAAAGGCCGAGTTTGCCTTTCCGGAAACGGAAACCAAGTCCAGCTATGTCCTGCAGCAAAGCCAATGGTCTA
ACTGGAGTGAAAAAGACGATCCTACAAAGGCCTACATGATCAAGGGTGGGGCGCCCGTCATCCTGACAGCTGATGCCCAA
CGCATCATGTTCGGTGACGACAACTTCATGCTTATTCCACAGCAGCTAACGGCATGGGACGGTACTACTGCAACTACTGG
TGCTTACCTGTCCGTGCTCTGTCGCATATACAGCCTGGACGGCGCCAATGAAATACTGCTTTACCCGCAACCGGCAGCAG
GTGATGCCAAGGACGGCAAATACGCATTCTCTGCCGTAGGTATCAACACCAACTGGGAACCTGGTAAGAAATATACCTAC
ACGCTGAACTTCTGCGGCAACGGCGGTGGTACTGGTGAGATTGATCCGAACCCCACTGATCCGACGAATCCCACCGATCC
GACCATTGATCCGGATCCGGTACCCGGTGGTAACGGTGGTGATCCTGTTCTGGGCAACCCCATCAAGTTTACTGTAACTG
TTGACGAGTGGACCGACCAGCCAGTAGATGTCGCGATGTAA

Upstream 100 bases:

>100_bases
CGTGGATGTTCCCATGTGATTTGCGGACCGTGCTCTCCATGCCTCACGATACGGAGGTAAAGAATGAATAGTTTATCTGT
TTAATATATTTTTAATTTTA

Downstream 100 bases:

>100_bases
AATCTAAAGTATTTTGTTTCATTTTTGATTGTAATTTAACAATCAGCCTGGACGGGATTGGACTTGCATTACCCCGCGAG
GGACAGGGCCGGATTTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MFYCMKKNLLFAAMAVTALASCSNDDVVDVNNGGGISFRASLDRAVTRTNVTSLQNLAAFNVTAIGDGKNYFTDLGVSSA
DNGVNWTTASTYYWPGYELAFFAYAPQAPAGTVSIDNASKKITGFSPAQAVADQKDLVISYNTGTKAVNEGPGVAMNFKH
ALSQIEVKAKCSNDKIKIEIMGVKLVNAAAKAEFAFPETETKSSYVLQQSQWSNWSEKDDPTKAYMIKGGAPVILTADAQ
RIMFGDDNFMLIPQQLTAWDGTTATTGAYLSVLCRIYSLDGANEILLYPQPAAGDAKDGKYAFSAVGINTNWEPGKKYTY
TLNFCGNGGGTGEIDPNPTDPTNPTDPTIDPDPVPGGNGGDPVLGNPIKFTVTVDEWTDQPVDVAM

Sequences:

>Translated_386_residues
MFYCMKKNLLFAAMAVTALASCSNDDVVDVNNGGGISFRASLDRAVTRTNVTSLQNLAAFNVTAIGDGKNYFTDLGVSSA
DNGVNWTTASTYYWPGYELAFFAYAPQAPAGTVSIDNASKKITGFSPAQAVADQKDLVISYNTGTKAVNEGPGVAMNFKH
ALSQIEVKAKCSNDKIKIEIMGVKLVNAAAKAEFAFPETETKSSYVLQQSQWSNWSEKDDPTKAYMIKGGAPVILTADAQ
RIMFGDDNFMLIPQQLTAWDGTTATTGAYLSVLCRIYSLDGANEILLYPQPAAGDAKDGKYAFSAVGINTNWEPGKKYTY
TLNFCGNGGGTGEIDPNPTDPTNPTDPTIDPDPVPGGNGGDPVLGNPIKFTVTVDEWTDQPVDVAM
>Mature_386_residues
MFYCMKKNLLFAAMAVTALASCSNDDVVDVNNGGGISFRASLDRAVTRTNVTSLQNLAAFNVTAIGDGKNYFTDLGVSSA
DNGVNWTTASTYYWPGYELAFFAYAPQAPAGTVSIDNASKKITGFSPAQAVADQKDLVISYNTGTKAVNEGPGVAMNFKH
ALSQIEVKAKCSNDKIKIEIMGVKLVNAAAKAEFAFPETETKSSYVLQQSQWSNWSEKDDPTKAYMIKGGAPVILTADAQ
RIMFGDDNFMLIPQQLTAWDGTTATTGAYLSVLCRIYSLDGANEILLYPQPAAGDAKDGKYAFSAVGINTNWEPGKKYTY
TLNFCGNGGGTGEIDPNPTDPTNPTDPTIDPDPVPGGNGGDPVLGNPIKFTVTVDEWTDQPVDVAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41189; Mature: 41189

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYCMKKNLLFAAMAVTALASCSNDDVVDVNNGGGISFRASLDRAVTRTNVTSLQNLAAF
CEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHHHCHHHHHHHHEE
NVTAIGDGKNYFTDLGVSSADNGVNWTTASTYYWPGYELAFFAYAPQAPAGTVSIDNASK
EEEEEECCCCEEEECCCCCCCCCCCEEEECEEECCCEEEEEEEECCCCCCCEEEECCCCC
KITGFSPAQAVADQKDLVISYNTGTKAVNEGPGVAMNFKHALSQIEVKAKCSNDKIKIEI
EECCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHEEEEEECCCCEEEEEE
MGVKLVNAAAKAEFAFPETETKSSYVLQQSQWSNWSEKDDPTKAYMIKGGAPVILTADAQ
EEEEEECHHHHCEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCC
RIMFGDDNFMLIPQQLTAWDGTTATTGAYLSVLCRIYSLDGANEILLYPQPAAGDAKDGK
EEEECCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
YAFSAVGINTNWEPGKKYTYTLNFCGNGGGTGEIDPNPTDPTNPTDPTIDPDPVPGGNGG
EEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPVLGNPIKFTVTVDEWTDQPVDVAM
CCCCCCCEEEEEEECCCCCCCEECCC
>Mature Secondary Structure
MFYCMKKNLLFAAMAVTALASCSNDDVVDVNNGGGISFRASLDRAVTRTNVTSLQNLAAF
CEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHHHCHHHHHHHHEE
NVTAIGDGKNYFTDLGVSSADNGVNWTTASTYYWPGYELAFFAYAPQAPAGTVSIDNASK
EEEEEECCCCEEEECCCCCCCCCCCEEEECEEECCCEEEEEEEECCCCCCCEEEECCCCC
KITGFSPAQAVADQKDLVISYNTGTKAVNEGPGVAMNFKHALSQIEVKAKCSNDKIKIEI
EECCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHEEEEEECCCCEEEEEE
MGVKLVNAAAKAEFAFPETETKSSYVLQQSQWSNWSEKDDPTKAYMIKGGAPVILTADAQ
EEEEEECHHHHCEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCC
RIMFGDDNFMLIPQQLTAWDGTTATTGAYLSVLCRIYSLDGANEILLYPQPAAGDAKDGK
EEEECCCCEEEECHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
YAFSAVGINTNWEPGKKYTYTLNFCGNGGGTGEIDPNPTDPTNPTDPTIDPDPVPGGNGG
EEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPVLGNPIKFTVTVDEWTDQPVDVAM
CCCCCCCEEEEEEECCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA