| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347718
Identifier: 29347718
GI number: 29347718
Start: 2883464
End: 2884300
Strand: Reverse
Name: 29347718
Synonym: BT_2308
Alternate gene names: NA
Gene position: 2884300-2883464 (Counterclockwise)
Preceding gene: 29347719
Following gene: 29347717
Centisome position: 46.07
GC content: 51.37
Gene sequence:
>837_bases ATGGCGGAGCCTGATCTTCTGGAACTGTTCAGAAAGCATGCGCAGGATGGGCAGAAAGAGATGGTCAGCCTGTTTTGCAA TGATGTGAGAAGACTCTCCCGGACGAAGAAGATAAAGAGGCTGCTCGTGTTGGGAAGGTACGCAGGGAACTCCGAACTCT GCGGTCATGTGCTCCGTGTGCTGGAGATGCTGCCGGAACTCCCCGGCATGGCTTGTCCTGCATACAGGGCCGTTCTGGTA TTGCTCTCCCTTTCACGGGACAGGGATGTTTTGTGCAGGTTGCGGGCAAATGCCGTCCTGCCATGCCGCAAGAGGGGACG CACGGAGGAAATGCTTTGGCTTTGTGAGATTTTGTATGCTATAGGCCCATCTGTTTCCCTGCATGATATTTGCAGGGAGG TTTGCTTGTATTTCTATCTGGAACGGAGGAAACAGCTCCGGGGATATTCCACTTGTGTCAGTGAACTGGACTTTCAGTTC GCAGAAAGGCGGTTGAGGATATTGTCCGTCGCCGTATTTCGTCTGAAAGTGATTTTTTACAGCCCCGGCGTGTATTCCGT CGGTACACTCTCCCTGCTGTGCCGTATGAGTTATTCGGCCTTCAGAAACAGGTTCCTGTCTGTTTACGGGTTACCCCCGG GACGTTGGCTAAGGAATCGGCGAATAAAACGCATATGTCTGGATATAAAATATAATCATGGACTTTCACTGGGAGAAATA TCGGAGAGGAACGGATTTTCATCAGCAAGCCGTCTGTGTGAATTCTGTAAAAGAAACATGGGATGCACTCCGGGGAGGCT GAAGCAGGCACTGGCTCACCGGTGGCGGAGCAAATAA
Upstream 100 bases:
>100_bases CTGGCGCAATACCCGTGTCTGGTTGATGACGATTGTATCAGAATAATGGGTGTGCTGTGAATGATAAGGCACGGTATGAA GTAAACGGGTATGGGCGGGA
Downstream 100 bases:
>100_bases AAATTCATCAGGCTTGATGTAGAGCTTATTTCAAATAAAAAGCGTAACGGCTATCAGTGCTCGTTTCGCTATCTTGCCGG TGTTTAATTAAAATCCCGAA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLV LLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQF AERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK
Sequences:
>Translated_278_residues MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLV LLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQF AERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK >Mature_277_residues AEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRVLEMLPELPGMACPAYRAVLVL LSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYAIGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFA ERRLRILSVAVFRLKVIFYSPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEIS ERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32235; Mature: 32103
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LEMLPELPGMACPAYRAVLVLLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYA HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH IGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFAERRLRILSVAVFRLKVIFY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AEPDLLELFRKHAQDGQKEMVSLFCNDVRRLSRTKKIKRLLVLGRYAGNSELCGHVLRV CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LEMLPELPGMACPAYRAVLVLLSLSRDRDVLCRLRANAVLPCRKRGRTEEMLWLCEILYA HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHH IGPSVSLHDICREVCLYFYLERRKQLRGYSTCVSELDFQFAERRLRILSVAVFRLKVIFY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPGVYSVGTLSLLCRMSYSAFRNRFLSVYGLPPGRWLRNRRIKRICLDIKYNHGLSLGEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCC SERNGFSSASRLCEFCKRNMGCTPGRLKQALAHRWRSK HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA