| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347717
Identifier: 29347717
GI number: 29347717
Start: 2882739
End: 2883359
Strand: Reverse
Name: 29347717
Synonym: BT_2307
Alternate gene names: NA
Gene position: 2883359-2882739 (Counterclockwise)
Preceding gene: 29347718
Following gene: 29347714
Centisome position: 46.06
GC content: 53.62
Gene sequence:
>621_bases ATGGAACTGTTTACTTTTATCCCTTATTTCCTGTTACTGGAGCGAGAAGAGAGTGACAGGAATACACTGGCAAACGCCAA CACCGAGTTCATCCGTGAGGTCTATGAGCTGCAACGTGTGGAAAAGGATGTTACGCTCGTCTTTTTCCAGCTGCAATATC TAAGTTGCAAACTGGTCATTCTGCGTGAGCATTACCGCACAGCACAAAAAGAGCACTTGCCCTGCTATGCCTATATCATT GGTACGCTGGAGTACCTGAAAGGTCTGCTGGACAGATGCAGGTTCATTCATAAGTGCGGTTCCGCCATCGCTCCGGCATG TCTGCCGACTACAGAGGGTGATCCCCCGGTCTGCTGGACGGCAGAGGTCATCTGCCTGATGGAACTGCTGTATGCCTGCC ACGAGCTGAAGATGTTCAACGGCGGTGAGGTGACACTCGGGCGTGTGGTGGAATACGTCTGCCATGTGCTGGGGGTGAAC GTGAAGAATGCCTCGAGCTACTACGCGCGGATGCGGCGGCGTAAGGCGGGAGACAGAACCTACTTCATCGACCGCCTGCG TGAAGTTCTGCTCAAACGGATGGAAGACGATGACGAGGGGCACAGGAGACGCAACCGATGA
Upstream 100 bases:
>100_bases TCATCAGGCTTGATGTAGAGCTTATTTCAAATAAAAAGCGTAACGGCTATCAGTGCTCGTTTCGCTATCTTGCCGGTGTT TAATTAAAATCCCGAACAGC
Downstream 100 bases:
>100_bases AATGCGGACCCTTTCACACACGGTTCTCCACGTGTGTGAAGGCCTTGCATTTACGGTTATTTGTTCAGTTCCAGAAGATG TCTGAGGTTGGGATCTGCGG
Product: tetracycline resistance element mobilization regulatory protein rteC
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MELFTFIPYFLLLEREESDRNTLANANTEFIREVYELQRVEKDVTLVFFQLQYLSCKLVILREHYRTAQKEHLPCYAYII GTLEYLKGLLDRCRFIHKCGSAIAPACLPTTEGDPPVCWTAEVICLMELLYACHELKMFNGGEVTLGRVVEYVCHVLGVN VKNASSYYARMRRRKAGDRTYFIDRLREVLLKRMEDDDEGHRRRNR
Sequences:
>Translated_206_residues MELFTFIPYFLLLEREESDRNTLANANTEFIREVYELQRVEKDVTLVFFQLQYLSCKLVILREHYRTAQKEHLPCYAYII GTLEYLKGLLDRCRFIHKCGSAIAPACLPTTEGDPPVCWTAEVICLMELLYACHELKMFNGGEVTLGRVVEYVCHVLGVN VKNASSYYARMRRRKAGDRTYFIDRLREVLLKRMEDDDEGHRRRNR >Mature_206_residues MELFTFIPYFLLLEREESDRNTLANANTEFIREVYELQRVEKDVTLVFFQLQYLSCKLVILREHYRTAQKEHLPCYAYII GTLEYLKGLLDRCRFIHKCGSAIAPACLPTTEGDPPVCWTAEVICLMELLYACHELKMFNGGEVTLGRVVEYVCHVLGVN VKNASSYYARMRRRKAGDRTYFIDRLREVLLKRMEDDDEGHRRRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24258; Mature: 24258
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFTFIPYFLLLEREESDRNTLANANTEFIREVYELQRVEKDVTLVFFQLQYLSCKLVI CCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREHYRTAQKEHLPCYAYIIGTLEYLKGLLDRCRFIHKCGSAIAPACLPTTEGDPPVCWT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHH AEVICLMELLYACHELKMFNGGEVTLGRVVEYVCHVLGVNVKNASSYYARMRRRKAGDRT HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH YFIDRLREVLLKRMEDDDEGHRRRNR HHHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MELFTFIPYFLLLEREESDRNTLANANTEFIREVYELQRVEKDVTLVFFQLQYLSCKLVI CCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LREHYRTAQKEHLPCYAYIIGTLEYLKGLLDRCRFIHKCGSAIAPACLPTTEGDPPVCWT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHH AEVICLMELLYACHELKMFNGGEVTLGRVVEYVCHVLGVNVKNASSYYARMRRRKAGDRT HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHH YFIDRLREVLLKRMEDDDEGHRRRNR HHHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA