| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347709
Identifier: 29347709
GI number: 29347709
Start: 2875505
End: 2875840
Strand: Reverse
Name: 29347709
Synonym: BT_2299
Alternate gene names: NA
Gene position: 2875840-2875505 (Counterclockwise)
Preceding gene: 29347710
Following gene: 29347708
Centisome position: 45.94
GC content: 49.11
Gene sequence:
>336_bases ATGAATTATGAACTGAACAAGGGAATCGGCGAGAGTGCGGAGTTCAAGGGACTCAAGGCTCAATATCTTTTTATTTTCGT CGGTGGGCTGCTGGCTCTGTTCGTGCTGTTTGTTATTCTTTATATGGCCGGCGTGAACCAGTGGTTCTGCATTGCTTTCG GCGTAATATCCGCATCCGTATTGGTCCGGCTGACTTTCCATCTGAACGGCAAGTTCGGGGAACACGGACTGATGAAGCTG CTGGCCAGGAAACAGCACCCCCGCTACCTGATCAACCGGATCAGTCCCCGGAAACTATTCACGATTAAAAAGAAGAACGT ATGCGTAACACACTAA
Upstream 100 bases:
>100_bases GCGAGCTGGTTTGGTGCGTGTATCTTTTTAATCGTGGCTGCCACTATTCTTCGTTCATTCTTTCTCTAAGAACCGGATTC ACCTATATATAATAATGTAT
Downstream 100 bases:
>100_bases AGGCTGCCACATTGGAAAGCAAGTTTCCGCTTCTCGCCGTCGAAGCGGACTGTATCATCTCCAAAGATGCGGACATCACC GCCGTCTTTGAGGTGGATCT
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; Conjugal Transfer Protein TraF; Transmembrane Conjugate Transposon Protein
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MNYELNKGIGESAEFKGLKAQYLFIFVGGLLALFVLFVILYMAGVNQWFCIAFGVISASVLVRLTFHLNGKFGEHGLMKL LARKQHPRYLINRISPRKLFTIKKKNVCVTH
Sequences:
>Translated_111_residues MNYELNKGIGESAEFKGLKAQYLFIFVGGLLALFVLFVILYMAGVNQWFCIAFGVISASVLVRLTFHLNGKFGEHGLMKL LARKQHPRYLINRISPRKLFTIKKKNVCVTH >Mature_111_residues MNYELNKGIGESAEFKGLKAQYLFIFVGGLLALFVLFVILYMAGVNQWFCIAFGVISASVLVRLTFHLNGKFGEHGLMKL LARKQHPRYLINRISPRKLFTIKKKNVCVTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12647; Mature: 12647
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYELNKGIGESAEFKGLKAQYLFIFVGGLLALFVLFVILYMAGVNQWFCIAFGVISASV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVRLTFHLNGKFGEHGLMKLLARKQHPRYLINRISPRKLFTIKKKNVCVTH HHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEECC >Mature Secondary Structure MNYELNKGIGESAEFKGLKAQYLFIFVGGLLALFVLFVILYMAGVNQWFCIAFGVISASV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVRLTFHLNGKFGEHGLMKLLARKQHPRYLINRISPRKLFTIKKKNVCVTH HHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA