| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347710
Identifier: 29347710
GI number: 29347710
Start: 2875872
End: 2876171
Strand: Reverse
Name: 29347710
Synonym: BT_2300
Alternate gene names: NA
Gene position: 2876171-2875872 (Counterclockwise)
Preceding gene: 29347711
Following gene: 29347709
Centisome position: 45.94
GC content: 50.67
Gene sequence:
>300_bases ATGAATACGAAACAACTTGTGTTCGTGGCGGTTATGTTAATCGCCACAGGCTCGCTCTATGCGCAAGGAAATGGATCGGC CGGTATCACGGAAGCGACGAAAATGGTCACAAGCTACTTCGATCCGGGAACGAAATTGTGCTACGCGATCGGAGCTGTGG TAGGTCTGGTCGGCGGGATTAAGGTGTACAACAAGTTCAGCTCCGGCGATCCGGATACCTCGAAAACGGCGGCGAGCTGG TTTGGTGCGTGTATCTTTTTAATCGTGGCTGCCACTATTCTTCGTTCATTCTTTCTCTAA
Upstream 100 bases:
>100_bases TATTCATTTTTCACGAGAAGAAACCCAAACAAATTTAATTAACAACGGGGGACGGCGGACTTTTCCATCTGTCGTGCCCA CATTCAAATTCAATTATTTT
Downstream 100 bases:
>100_bases GAACCGGATTCACCTATATATAATAATGTATATGAATTATGAACTGAACAAGGGAATCGGCGAGAGTGCGGAGTTCAAGG GACTCAAGGCTCAATATCTT
Product: conjugate transposon protein
Products: NA
Alternate protein names: TraE Protein; Conjugate Transposon Protein; F Pilus Assembly Protein TraE; Conjugate Transposon TraE; Transmembrane Conjugate Transposon Protein; Carbamoyl Phosphate Synthetase
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MNTKQLVFVAVMLIATGSLYAQGNGSAGITEATKMVTSYFDPGTKLCYAIGAVVGLVGGIKVYNKFSSGDPDTSKTAASW FGACIFLIVAATILRSFFL
Sequences:
>Translated_99_residues MNTKQLVFVAVMLIATGSLYAQGNGSAGITEATKMVTSYFDPGTKLCYAIGAVVGLVGGIKVYNKFSSGDPDTSKTAASW FGACIFLIVAATILRSFFL >Mature_99_residues MNTKQLVFVAVMLIATGSLYAQGNGSAGITEATKMVTSYFDPGTKLCYAIGAVVGLVGGIKVYNKFSSGDPDTSKTAASW FGACIFLIVAATILRSFFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10356; Mature: 10356
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKQLVFVAVMLIATGSLYAQGNGSAGITEATKMVTSYFDPGTKLCYAIGAVVGLVGGI CCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KVYNKFSSGDPDTSKTAASWFGACIFLIVAATILRSFFL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTKQLVFVAVMLIATGSLYAQGNGSAGITEATKMVTSYFDPGTKLCYAIGAVVGLVGGI CCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KVYNKFSSGDPDTSKTAASWFGACIFLIVAATILRSFFL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA