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The map label for this gene is traC [C]

Identifier: 29347708

GI number: 29347708

Start: 2873493

End: 2875520

Strand: Reverse

Name: traC [C]

Synonym: BT_2298

Alternate gene names: 29347708

Gene position: 2875520-2873493 (Counterclockwise)

Preceding gene: 29347709

Following gene: 29347707

Centisome position: 45.93

GC content: 50.94

Gene sequence:

>2028_bases
ATGCGTAACACACTAAAGGCTGCCACATTGGAAAGCAAGTTTCCGCTTCTCGCCGTCGAAGCGGACTGTATCATCTCCAA
AGATGCGGACATCACCGCCGTCTTTGAGGTGGATCTGCCCGAACTCTTCACGGTGACGGCAGCTGAATACGAGGCTATCC
ATGCGGCATGGGCAAAGGCAATCAAGGTATTGCCCAATTATACGGTGGTACATAAGCAGGATTGGTTTATCCGGGAGGAT
TACCGCAGCCAGACGGACAAGGAGAATCTAAGTTTCCTTTCCCGAAGCTACGAGATGCACTTCAACGAGCGTCCTTTCTT
GAACCATAAATGCTATCTGTACCTGACCAAAACGACGAAAGAGCGCATGAGGATGCAGAGCAGCTTCTCTTCGCTGTGCA
GGGGATTCATCATCCCCAAGGAGGTGGACAAGGATACCACCGCCCATTTTCTGGATACGGTGGGGCAATTCGCCCGTATC
GTGAACGATACAGGGCTGGTACACCTAAGACGGCTCGTCGGTGATGAGATTACCGGCACGGAGAATAAGGCCGGACTGGT
GGAGAAATATTTCTGTCTGTCAATGGAAAATACCACTGCACTGGAAGACATCGAACTCGGAGATGACGGCCTGCGTGTCG
GTGACAAGCACGTTTCGGTACATACGCTCTCGGAACTGGATGCGTTGCCCAGCAAGGTGGGTACGGACTGCCGGTATGAA
AGGCTATCGACGGACAAAAGCGACTGCAAGCTGTCATTCGCCAGTCCGGTAGGCCTGCTGCTCTCGTGCAATCACCTGTA
CAACCAGTATATCTTTCTGGATGACAGCGGCGAGAACCTGCAACGTTTTGAGAAGAACGCACGCAACATGCAGTCGCTCT
CGAAGTACTCACGGAGTAACCAGATTAACAAAGAGTGGATCGATCTGTACCTGAATGACGCACATTCGTTCGGGCTTACC
TCGGTGCGTGCCCATTGCAACATCATCGCATGGACGGACAATCCTATGGAGGTGAAGAATATGCGTAATGACGTGGGCAG
CCAGATCGCTATGATGGAATGCAAGCCACGCCATAATACGGTGGACGCCGCCACGCTGTACTGGGCGGCGATACCGGGGA
ACGGCGCTGACTTTCCGGCAGAGGAGAGCTTCTACACGTTCATCGAACAGGCTCTCTGCTTCTGGGTGGAAGAAACGAAC
TACCGCAGCTCCGTTTCACCTTTCGGACTGAAGATGTCAGACCGTATCAGCGGAAAACCGCTGCACGTGGACATCTCCGA
CCTGCCGATGAAACGTGGCGTAACCACCAACCGCAACAAATTCGTATTGGGCGGTTCGGGAAGCGGCAAGTCATTCTTTA
TGAATCATTTGGCGAGGCAATATTATGAACAGGGCACGCACGTGGTATTGATCGACACGGGAAACAGTTACCAGGGGCTT
TGCTCGCTGATACACCAGAAGAGCGGTGGAAAGGACGGTATCTATTTCACTTATACGGACGAAAACCCGATAGCGTTCAA
CCCTTTTTTCACGGATGATAAAGTTTTCGATATTGAGAAGCGTGAGAGTATCAAGACACTAATCCTCACACTCTGGAAAA
AGGACAATGAACCGGCGACACGTTCGGAAGAAGTGGCTCTGTCCAATGCGGTGTCCCTGTATATCAGGCGCATCAAGGAG
GATGAAAGCATCGTTCCCTCGTTCAACACCTTCTACGAGTTCGTGAAAACGGACTACCGGAGGATACTGGAAGAGAAAGA
AGTCCGGGAAAAGGATTTCGACCTTGCGGGGTTCCTGAACGTGCTGGAGCCTTATTACCGTGGTGGAGAATATGATTTTC
TGCTTAACTCCGACAAGCAGCTTGACTTGCTCGGTAAGCGGTTTATCGTCTTCGAAATTGATCAGATCAAAGATCACCCC
ATTCTTTTTCCGGTGACGACTATTATTATTATGGAGTTGTTTATCAACAAGATGCGTCGTCTGAAAGGGGTACGCAAGAT
GATCATCATAGAGGAAGCGTGGCTGTGA

Upstream 100 bases:

>100_bases
AACACGGACTGATGAAGCTGCTGGCCAGGAAACAGCACCCCCGCTACCTGATCAACCGGATCAGTCCCCGGAAACTATTC
ACGATTAAAAAGAAGAACGT

Downstream 100 bases:

>100_bases
CATGTAAGTCTTGTATATGATTGTTCAACTTTCATTCCACGAGTTGGAAATCGAACGATTGAACCTGTTGTTCCGTCAAC
AGTAGCCTATGGGAACGTGC

Product: conjugate transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MRNTLKAATLESKFPLLAVEADCIISKDADITAVFEVDLPELFTVTAAEYEAIHAAWAKAIKVLPNYTVVHKQDWFIRED
YRSQTDKENLSFLSRSYEMHFNERPFLNHKCYLYLTKTTKERMRMQSSFSSLCRGFIIPKEVDKDTTAHFLDTVGQFARI
VNDTGLVHLRRLVGDEITGTENKAGLVEKYFCLSMENTTALEDIELGDDGLRVGDKHVSVHTLSELDALPSKVGTDCRYE
RLSTDKSDCKLSFASPVGLLLSCNHLYNQYIFLDDSGENLQRFEKNARNMQSLSKYSRSNQINKEWIDLYLNDAHSFGLT
SVRAHCNIIAWTDNPMEVKNMRNDVGSQIAMMECKPRHNTVDAATLYWAAIPGNGADFPAEESFYTFIEQALCFWVEETN
YRSSVSPFGLKMSDRISGKPLHVDISDLPMKRGVTTNRNKFVLGGSGSGKSFFMNHLARQYYEQGTHVVLIDTGNSYQGL
CSLIHQKSGGKDGIYFTYTDENPIAFNPFFTDDKVFDIEKRESIKTLILTLWKKDNEPATRSEEVALSNAVSLYIRRIKE
DESIVPSFNTFYEFVKTDYRRILEEKEVREKDFDLAGFLNVLEPYYRGGEYDFLLNSDKQLDLLGKRFIVFEIDQIKDHP
ILFPVTTIIIMELFINKMRRLKGVRKMIIIEEAWL

Sequences:

>Translated_675_residues
MRNTLKAATLESKFPLLAVEADCIISKDADITAVFEVDLPELFTVTAAEYEAIHAAWAKAIKVLPNYTVVHKQDWFIRED
YRSQTDKENLSFLSRSYEMHFNERPFLNHKCYLYLTKTTKERMRMQSSFSSLCRGFIIPKEVDKDTTAHFLDTVGQFARI
VNDTGLVHLRRLVGDEITGTENKAGLVEKYFCLSMENTTALEDIELGDDGLRVGDKHVSVHTLSELDALPSKVGTDCRYE
RLSTDKSDCKLSFASPVGLLLSCNHLYNQYIFLDDSGENLQRFEKNARNMQSLSKYSRSNQINKEWIDLYLNDAHSFGLT
SVRAHCNIIAWTDNPMEVKNMRNDVGSQIAMMECKPRHNTVDAATLYWAAIPGNGADFPAEESFYTFIEQALCFWVEETN
YRSSVSPFGLKMSDRISGKPLHVDISDLPMKRGVTTNRNKFVLGGSGSGKSFFMNHLARQYYEQGTHVVLIDTGNSYQGL
CSLIHQKSGGKDGIYFTYTDENPIAFNPFFTDDKVFDIEKRESIKTLILTLWKKDNEPATRSEEVALSNAVSLYIRRIKE
DESIVPSFNTFYEFVKTDYRRILEEKEVREKDFDLAGFLNVLEPYYRGGEYDFLLNSDKQLDLLGKRFIVFEIDQIKDHP
ILFPVTTIIIMELFINKMRRLKGVRKMIIIEEAWL
>Mature_675_residues
MRNTLKAATLESKFPLLAVEADCIISKDADITAVFEVDLPELFTVTAAEYEAIHAAWAKAIKVLPNYTVVHKQDWFIRED
YRSQTDKENLSFLSRSYEMHFNERPFLNHKCYLYLTKTTKERMRMQSSFSSLCRGFIIPKEVDKDTTAHFLDTVGQFARI
VNDTGLVHLRRLVGDEITGTENKAGLVEKYFCLSMENTTALEDIELGDDGLRVGDKHVSVHTLSELDALPSKVGTDCRYE
RLSTDKSDCKLSFASPVGLLLSCNHLYNQYIFLDDSGENLQRFEKNARNMQSLSKYSRSNQINKEWIDLYLNDAHSFGLT
SVRAHCNIIAWTDNPMEVKNMRNDVGSQIAMMECKPRHNTVDAATLYWAAIPGNGADFPAEESFYTFIEQALCFWVEETN
YRSSVSPFGLKMSDRISGKPLHVDISDLPMKRGVTTNRNKFVLGGSGSGKSFFMNHLARQYYEQGTHVVLIDTGNSYQGL
CSLIHQKSGGKDGIYFTYTDENPIAFNPFFTDDKVFDIEKRESIKTLILTLWKKDNEPATRSEEVALSNAVSLYIRRIKE
DESIVPSFNTFYEFVKTDYRRILEEKEVREKDFDLAGFLNVLEPYYRGGEYDFLLNSDKQLDLLGKRFIVFEIDQIKDHP
ILFPVTTIIIMELFINKMRRLKGVRKMIIIEEAWL

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77517; Mature: 77517

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTLKAATLESKFPLLAVEADCIISKDADITAVFEVDLPELFTVTAAEYEAIHAAWAKA
CCCCCCHHHHCCCCCEEEEECCEEEECCCCEEEEEEECCCHHEEEEHHHHHHHHHHHHHH
IKVLPNYTVVHKQDWFIREDYRSQTDKENLSFLSRSYEMHFNERPFLNHKCYLYLTKTTK
HHHCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHH
ERMRMQSSFSSLCRGFIIPKEVDKDTTAHFLDTVGQFARIVNDTGLVHLRRLVGDEITGT
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
ENKAGLVEKYFCLSMENTTALEDIELGDDGLRVGDKHVSVHTLSELDALPSKVGTDCRYE
CCCCCHHHHHEEEECCCCCCCCEEECCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCHH
RLSTDKSDCKLSFASPVGLLLSCNHLYNQYIFLDDSGENLQRFEKNARNMQSLSKYSRSN
HHCCCCCCCEEEECCCCCCEEEEHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
QINKEWIDLYLNDAHSFGLTSVRAHCNIIAWTDNPMEVKNMRNDVGSQIAMMECKPRHNT
CCCHHHHHEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCC
VDAATLYWAAIPGNGADFPAEESFYTFIEQALCFWVEETNYRSSVSPFGLKMSDRISGKP
CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCE
LHVDISDLPMKRGVTTNRNKFVLGGSGSGKSFFMNHLARQYYEQGTHVVLIDTGNSYQGL
EEEEHHHCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
CSLIHQKSGGKDGIYFTYTDENPIAFNPFFTDDKVFDIEKRESIKTLILTLWKKDNEPAT
HHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCC
RSEEVALSNAVSLYIRRIKEDESIVPSFNTFYEFVKTDYRRILEEKEVREKDFDLAGFLN
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VLEPYYRGGEYDFLLNSDKQLDLLGKRFIVFEIDQIKDHPILFPVTTIIIMELFINKMRR
HHHHHHCCCCEEEEECCCCCHHHHCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
LKGVRKMIIIEEAWL
HHHHHHEEEEEECCC
>Mature Secondary Structure
MRNTLKAATLESKFPLLAVEADCIISKDADITAVFEVDLPELFTVTAAEYEAIHAAWAKA
CCCCCCHHHHCCCCCEEEEECCEEEECCCCEEEEEEECCCHHEEEEHHHHHHHHHHHHHH
IKVLPNYTVVHKQDWFIREDYRSQTDKENLSFLSRSYEMHFNERPFLNHKCYLYLTKTTK
HHHCCCEEEEECCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHH
ERMRMQSSFSSLCRGFIIPKEVDKDTTAHFLDTVGQFARIVNDTGLVHLRRLVGDEITGT
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
ENKAGLVEKYFCLSMENTTALEDIELGDDGLRVGDKHVSVHTLSELDALPSKVGTDCRYE
CCCCCHHHHHEEEECCCCCCCCEEECCCCCCEECCCEEEEEEHHHHHHHHHHHCCCCCHH
RLSTDKSDCKLSFASPVGLLLSCNHLYNQYIFLDDSGENLQRFEKNARNMQSLSKYSRSN
HHCCCCCCCEEEECCCCCCEEEEHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
QINKEWIDLYLNDAHSFGLTSVRAHCNIIAWTDNPMEVKNMRNDVGSQIAMMECKPRHNT
CCCHHHHHEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCC
VDAATLYWAAIPGNGADFPAEESFYTFIEQALCFWVEETNYRSSVSPFGLKMSDRISGKP
CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCE
LHVDISDLPMKRGVTTNRNKFVLGGSGSGKSFFMNHLARQYYEQGTHVVLIDTGNSYQGL
EEEEHHHCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
CSLIHQKSGGKDGIYFTYTDENPIAFNPFFTDDKVFDIEKRESIKTLILTLWKKDNEPAT
HHHHHHCCCCCCCEEEEEECCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCC
RSEEVALSNAVSLYIRRIKEDESIVPSFNTFYEFVKTDYRRILEEKEVREKDFDLAGFLN
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VLEPYYRGGEYDFLLNSDKQLDLLGKRFIVFEIDQIKDHPILFPVTTIIIMELFINKMRR
HHHHHHCCCCEEEEECCCCCHHHHCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
LKGVRKMIIIEEAWL
HHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA