Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347684

Identifier: 29347684

GI number: 29347684

Start: 2854798

End: 2855523

Strand: Reverse

Name: 29347684

Synonym: BT_2274

Alternate gene names: NA

Gene position: 2855523-2854798 (Counterclockwise)

Preceding gene: 29347691

Following gene: 29347683

Centisome position: 45.61

GC content: 46.42

Gene sequence:

>726_bases
ATGGAAATGAAACAGAAGCTATTAACAGATATTGAGCTGGATGTTCATGAGCTGAAGCTACTCATGAATACGTTTTCTAA
AGAGCCGACTCAGACTTTGTCTGAACTGTTGAAGCGGAGCATCCTACGTATGCAGGAGCGTTTGGAACAGTTGTCGGAAG
AGATAAGTGCTGTGCCGGTGGAAGCCTCGCCTTCTCCTGTAGCGGAAGCGGAAAGTGAAGCCCCCATTGTTGAAGAACAA
GCCCCTGTAATAGAGGAAGTTGAATGTCCGGTGATAGAAGAGAAGGTCGTGGAAGAGAATGAAGCGACAGCACCGGGAGA
AGATGAACCTGTGATAGTACAGGAACCGCAGACTGTTGTGGAAGAAGCAGTAATTGAGGAACCTGTTGTCGAAGACGAAA
TGGAAGAGAAAGAAGCGGAAGATGAGTCGGAAGACGACGAATCGCTTCTGATAGAGGAGCCGAAAACTGCCGTATTGGGC
GAAAGCATAAAGATGGCTGCCGGATTACGTCATTCCATCAGCCTGAATGATTCTTTCCGTTTCTCGCGTGAGATATTCGG
CGGAGACCCCGAACTGATGAACCGTGTTATCGAGCAGATATCAGTCATGAGTTCTTATAAGACTGCCGTGGCATTTCTTG
CCTCGAAAGTCAGCGTAAACGAAGAGAATGAGGCGATGATCGACTTTTTGGAGTTGCTAAAAAAGTATTTTAATCAATCA
GCATAA

Upstream 100 bases:

>100_bases
GGACAAAGGTAAACAATTCGATGTACAAGAACTGTTAAATTATCCATTATTTTAAGTTATTGCATAAATTATTCCTACAT
TCGCACCATAATAACAATGG

Downstream 100 bases:

>100_bases
AAGTTTATGGGAAAGTTATATGTAGTACCTACGCCGGTAGGAAATCTAGAGGACATGACCTTTCGGGCAATCAGGGTGCT
GAAAGAGGTCGATCTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ
APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG
ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS
A

Sequences:

>Translated_241_residues
MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ
APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG
ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS
A
>Mature_241_residues
MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ
APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG
ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27054; Mature: 27054

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EASPSPVAEAESEAPIVEEQAPVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVV
CCCCCCCHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHH
EEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLGESIKMAAGLRHSISLNDSFR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHCCCCCCHH
FSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EASPSPVAEAESEAPIVEEQAPVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVV
CCCCCCCHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHH
EEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLGESIKMAAGLRHSISLNDSFR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHCCCCCCHH
FSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA