| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347684
Identifier: 29347684
GI number: 29347684
Start: 2854798
End: 2855523
Strand: Reverse
Name: 29347684
Synonym: BT_2274
Alternate gene names: NA
Gene position: 2855523-2854798 (Counterclockwise)
Preceding gene: 29347691
Following gene: 29347683
Centisome position: 45.61
GC content: 46.42
Gene sequence:
>726_bases ATGGAAATGAAACAGAAGCTATTAACAGATATTGAGCTGGATGTTCATGAGCTGAAGCTACTCATGAATACGTTTTCTAA AGAGCCGACTCAGACTTTGTCTGAACTGTTGAAGCGGAGCATCCTACGTATGCAGGAGCGTTTGGAACAGTTGTCGGAAG AGATAAGTGCTGTGCCGGTGGAAGCCTCGCCTTCTCCTGTAGCGGAAGCGGAAAGTGAAGCCCCCATTGTTGAAGAACAA GCCCCTGTAATAGAGGAAGTTGAATGTCCGGTGATAGAAGAGAAGGTCGTGGAAGAGAATGAAGCGACAGCACCGGGAGA AGATGAACCTGTGATAGTACAGGAACCGCAGACTGTTGTGGAAGAAGCAGTAATTGAGGAACCTGTTGTCGAAGACGAAA TGGAAGAGAAAGAAGCGGAAGATGAGTCGGAAGACGACGAATCGCTTCTGATAGAGGAGCCGAAAACTGCCGTATTGGGC GAAAGCATAAAGATGGCTGCCGGATTACGTCATTCCATCAGCCTGAATGATTCTTTCCGTTTCTCGCGTGAGATATTCGG CGGAGACCCCGAACTGATGAACCGTGTTATCGAGCAGATATCAGTCATGAGTTCTTATAAGACTGCCGTGGCATTTCTTG CCTCGAAAGTCAGCGTAAACGAAGAGAATGAGGCGATGATCGACTTTTTGGAGTTGCTAAAAAAGTATTTTAATCAATCA GCATAA
Upstream 100 bases:
>100_bases GGACAAAGGTAAACAATTCGATGTACAAGAACTGTTAAATTATCCATTATTTTAAGTTATTGCATAAATTATTCCTACAT TCGCACCATAATAACAATGG
Downstream 100 bases:
>100_bases AAGTTTATGGGAAAGTTATATGTAGTACCTACGCCGGTAGGAAATCTAGAGGACATGACCTTTCGGGCAATCAGGGTGCT GAAAGAGGTCGATCTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS A
Sequences:
>Translated_241_residues MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS A >Mature_241_residues MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPVEASPSPVAEAESEAPIVEEQ APVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVVEEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLG ESIKMAAGLRHSISLNDSFRFSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27054; Mature: 27054
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EASPSPVAEAESEAPIVEEQAPVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVV CCCCCCCHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHH EEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLGESIKMAAGLRHSISLNDSFR HHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHCCCCCCHH FSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure MEMKQKLLTDIELDVHELKLLMNTFSKEPTQTLSELLKRSILRMQERLEQLSEEISAVPV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EASPSPVAEAESEAPIVEEQAPVIEEVECPVIEEKVVEENEATAPGEDEPVIVQEPQTVV CCCCCCCHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHHH EEAVIEEPVVEDEMEEKEAEDESEDDESLLIEEPKTAVLGESIKMAAGLRHSISLNDSFR HHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHHCCCCCCHH FSREIFGGDPELMNRVIEQISVMSSYKTAVAFLASKVSVNEENEAMIDFLELLKKYFNQS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA