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The map label for this gene is rsmI [H]

Identifier: 29347683

GI number: 29347683

Start: 2854117

End: 2854791

Strand: Reverse

Name: rsmI [H]

Synonym: BT_2273

Alternate gene names: 29347683

Gene position: 2854791-2854117 (Counterclockwise)

Preceding gene: 29347684

Following gene: 29347682

Centisome position: 45.6

GC content: 46.52

Gene sequence:

>675_bases
ATGGGAAAGTTATATGTAGTACCTACGCCGGTAGGAAATCTAGAGGACATGACCTTTCGGGCAATCAGGGTGCTGAAAGA
GGTCGATCTGATTTTGGCAGAGGATACACGTACTTCCGGTATTTTGCTGAAACACTTTGAAATAAAGAATGCAATGCAAT
CTCATCACAAATTTAATGAACATAAAACGGTGGAAAGTGTTGTTAATAGAATAAAGGCAGGTGAAACCGTGGCATTGATT
TCGGATGCCGGAACACCCGGGATTTCTGATCCGGGATTTTTGGTAGTCCGCGAATGTGTGCGCAACGGTATCGAAGTGCA
ATGTTTGCCGGGAGCGACAGCTTTTGTTCCGGCATTGGTAGCATCGGGACTGCCGAATGAAAAGTTCTGCTTCGAAGGGT
TCCTCCCTCAGAAGAAAGGACGACAGACACGACTGAAGGCATTGGCAGAAGAACATCGTACTATGGTGTTTTATGAATCG
CCTCACCGCTTGTTGAAAACGTTGACACAGTTTGCCGAATATTTCGGCACTGAACGTCAGGCAACCGTGTCTCGCGAAAT
TTCCAAACTCCACGAAGAAACCGTTCGGGGAAGTTTGGCGGAATTGATAGAACACTTTACCGCTACCGAGCCCCGGGGCG
AGATTGTGATAGTATTAGCAGGAATAGACGATTAA

Upstream 100 bases:

>100_bases
ATTTCTTGCCTCGAAAGTCAGCGTAAACGAAGAGAATGAGGCGATGATCGACTTTTTGGAGTTGCTAAAAAAGTATTTTA
ATCAATCAGCATAAAAGTTT

Downstream 100 bases:

>100_bases
AATAACTTCATTTAAAAACGTAAAACGTAAACGTATGAAAAAGTTAGCAGTTTTATTTATGTGCGCAGCCATGTTGGCTT
CGTGTGACTTTAAAGGTGGA

Product: methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGKLYVVPTPVGNLEDMTFRAIRVLKEVDLILAEDTRTSGILLKHFEIKNAMQSHHKFNEHKTVESVVNRIKAGETVALI
SDAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYES
PHRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD

Sequences:

>Translated_224_residues
MGKLYVVPTPVGNLEDMTFRAIRVLKEVDLILAEDTRTSGILLKHFEIKNAMQSHHKFNEHKTVESVVNRIKAGETVALI
SDAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYES
PHRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD
>Mature_223_residues
GKLYVVPTPVGNLEDMTFRAIRVLKEVDLILAEDTRTSGILLKHFEIKNAMQSHHKFNEHKTVESVVNRIKAGETVALIS
DAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESP
HRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=223, Percent_Identity=46.6367713004484, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 24912; Mature: 24781

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLYVVPTPVGNLEDMTFRAIRVLKEVDLILAEDTRTSGILLKHFEIKNAMQSHHKFNE
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHHCCH
HKTVESVVNRIKAGETVALISDAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALV
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH
ASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESPHRLLKTLTQFAEYFGTERQ
HCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCH
ATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
GKLYVVPTPVGNLEDMTFRAIRVLKEVDLILAEDTRTSGILLKHFEIKNAMQSHHKFNE
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHHHHHHHHHHCCH
HKTVESVVNRIKAGETVALISDAGTPGISDPGFLVVRECVRNGIEVQCLPGATAFVPALV
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHH
ASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESPHRLLKTLTQFAEYFGTERQ
HCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCH
ATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]