| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347628
Identifier: 29347628
GI number: 29347628
Start: 2786521
End: 2786919
Strand: Reverse
Name: 29347628
Synonym: BT_2218
Alternate gene names: NA
Gene position: 2786919-2786521 (Counterclockwise)
Preceding gene: 29347629
Following gene: 29347627
Centisome position: 44.52
GC content: 33.33
Gene sequence:
>399_bases ATGAAGTATATTATTCTGATTTTTCTTCTTGCTATTGTTAGTTGTAATGATGCAGAAGATGATGAAATATATATCAATGA TTTTCCCCACAGGATATCAGAGCCTCCATTATTAGATAATAAAGGTGATACTGCTTTTATTATTATGACTCCTGCGGAAG GATGGAGATTGCATGCTGCTGGGACTGTTGTGAATAAGGATTCTATTGCTCTCAATGTAAAAATGACCCATACTTTTTTG CTTGAAGAAGATTGGTTTTCAATAAAAAAAGAACAGGAGGATTCGGTGATGACAGTAATTGTAGACGAAAATACATCTGG TGATATTAGGGAGATAATCTTATGGCTTTCTTATATTGGCTCATCAATGAGCACATATACAATAAAGCAAAATCCATAA
Upstream 100 bases:
>100_bases TTCTATTTAGTTAATAAAGATATGTCGATATCTTTTGAAGCTGGAGGCTATGAATTAAACACAGGCTTTAATATGATCTG TGATATTATATTGTAAAAGA
Downstream 100 bases:
>100_bases ATTATATAACTTATGAAATTGAAATACTATTTTTTGTTAGTTATCCTTGCTTTATTTACTTCATGTAGTAATGAACTAGG TATGCAAGATAATCTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKYIILIFLLAIVSCNDAEDDEIYINDFPHRISEPPLLDNKGDTAFIIMTPAEGWRLHAAGTVVNKDSIALNVKMTHTFL LEEDWFSIKKEQEDSVMTVIVDENTSGDIREIILWLSYIGSSMSTYTIKQNP
Sequences:
>Translated_132_residues MKYIILIFLLAIVSCNDAEDDEIYINDFPHRISEPPLLDNKGDTAFIIMTPAEGWRLHAAGTVVNKDSIALNVKMTHTFL LEEDWFSIKKEQEDSVMTVIVDENTSGDIREIILWLSYIGSSMSTYTIKQNP >Mature_132_residues MKYIILIFLLAIVSCNDAEDDEIYINDFPHRISEPPLLDNKGDTAFIIMTPAEGWRLHAAGTVVNKDSIALNVKMTHTFL LEEDWFSIKKEQEDSVMTVIVDENTSGDIREIILWLSYIGSSMSTYTIKQNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15025; Mature: 15025
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIILIFLLAIVSCNDAEDDEIYINDFPHRISEPPLLDNKGDTAFIIMTPAEGWRLHAA CHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC GTVVNKDSIALNVKMTHTFLLEEDWFSIKKEQEDSVMTVIVDENTSGDIREIILWLSYIG CEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC SSMSTYTIKQNP CCCEEEEEECCC >Mature Secondary Structure MKYIILIFLLAIVSCNDAEDDEIYINDFPHRISEPPLLDNKGDTAFIIMTPAEGWRLHAA CHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEC GTVVNKDSIALNVKMTHTFLLEEDWFSIKKEQEDSVMTVIVDENTSGDIREIILWLSYIG CEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC SSMSTYTIKQNP CCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA