| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347627
Identifier: 29347627
GI number: 29347627
Start: 2785123
End: 2786508
Strand: Reverse
Name: 29347627
Synonym: BT_2217
Alternate gene names: NA
Gene position: 2786508-2785123 (Counterclockwise)
Preceding gene: 29347628
Following gene: 29347626
Centisome position: 44.51
GC content: 32.83
Gene sequence:
>1386_bases ATGAAATTGAAATACTATTTTTTGTTAGTTATCCTTGCTTTATTTACTTCATGTAGTAATGAACTAGGTATGCAAGATAA TCTGAATGATTCTAAAATTTTATTATCTTCAGATGAGTATATTAGCATTGCTTATGATAATCCTGGAATAATTACTTCAG AAGAGGCTAAGCAACTTGTTTTGGACTTTAATCCAACAGGATTACAGACTAGAAATAATAATGTAAAAATTATGGCTATT TCTACATATAATGTATCTAGTTCTTCTGGATTAAAAACAAGAGTCGGTTCAACTAATCTTACTACTATTCCTGTTTATAA AATTGAATTTTTAAGTGATGAGGGGAAAGGTGTGGCTTATGTTCCTGCTGATGAACGTTTTGCAAAGATAATGGCTTATT TGCCTAAAACAGATTTAAAAGACTCTGTTAAATATGTAGATTCTAAGTCTATGCTCTATTTATCAGAATTGAGTCTGTTG GAAGATGCCAAATATTATGAAAAGGTAAAATCAGAACTGAGAGCTAAAACATTAGCGAAAATAGCAAAAACTTTAAACGT GAAGGCTGTGAGGTATGATGAGATTCAAGATATAATTATAGTAAAGGATGAGATTCTATCCCGTTCTGAACCAACATTTC CTATTGGAAATCCGATAGGTTTTGCTGGTCTGTACTGTAGTAGTACAGAGTGGAATCAAGACGCACCATATAATGATTTG CTACAGAAAGAAAATTGTGATCTTTATGATACAGGCTCACCTACTTACGAGGCTGTCCCTGCTGGTTGTGCTGTTATTTC AATAGCACAGATTATGGCTTCTTTAGAACCTGACTTAACGGTTGATGGTCTGAAAATTGATTGGAATATCTTGAAAGCGC AAAAACAAATTATTGCTCCTTCATCTTGGCAAACTCCTTCCTCTGAAACAACTAGAGAAATGGTTGCTAAATTGATAAAA TATATCTATATAGCAACTAATACACAGCCTGTTAGAAATTCAAGTGGTTATGTTACTGGGTCTGGTACTTATTCTTCTGA TACATCTAGCTTTTTCTATCGTTTTTTTTCAACTAGTGGTCTTAAAAATGGTTGGGATGGTAATGCTGCATTTCAATCTT TACAACTAGCTAAGTTGGTATGGATAGCTGCAACCTCTAATCGTGGGGGAAGCCATGCTTTTATTTTAGATGGTTTTGCA TACTGGAGACCCCAAACAAGATATTTAGTTAAAAACTTTGATTTCTATTTCCATGCGAATATGGGTTGGGGAGGATATTA CGATGGCTTTTATTTAGTAAATAAAGACCTTTCTATTACCTTTGATACATCTAATGGAAGTTATGATAGGAACTTTTCTA TGATTTACAATATTATAAATAAATAA
Upstream 100 bases:
>100_bases TACATCTGGTGATATTAGGGAGATAATCTTATGGCTTTCTTATATTGGCTCATCAATGAGCACATATACAATAAAGCAAA ATCCATAAATTATATAACTT
Downstream 100 bases:
>100_bases ACTGGGGCTTAGGTCTGTTTTGAGCAGCAAAGGCTGATTTATAGTCTTTGTTGCTCTTTTTATTGAATATTTAAATAATA ATCGTAGATTCTGCCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKLKYYFLLVILALFTSCSNELGMQDNLNDSKILLSSDEYISIAYDNPGIITSEEAKQLVLDFNPTGLQTRNNNVKIMAI STYNVSSSSGLKTRVGSTNLTTIPVYKIEFLSDEGKGVAYVPADERFAKIMAYLPKTDLKDSVKYVDSKSMLYLSELSLL EDAKYYEKVKSELRAKTLAKIAKTLNVKAVRYDEIQDIIIVKDEILSRSEPTFPIGNPIGFAGLYCSSTEWNQDAPYNDL LQKENCDLYDTGSPTYEAVPAGCAVISIAQIMASLEPDLTVDGLKIDWNILKAQKQIIAPSSWQTPSSETTREMVAKLIK YIYIATNTQPVRNSSGYVTGSGTYSSDTSSFFYRFFSTSGLKNGWDGNAAFQSLQLAKLVWIAATSNRGGSHAFILDGFA YWRPQTRYLVKNFDFYFHANMGWGGYYDGFYLVNKDLSITFDTSNGSYDRNFSMIYNIINK
Sequences:
>Translated_461_residues MKLKYYFLLVILALFTSCSNELGMQDNLNDSKILLSSDEYISIAYDNPGIITSEEAKQLVLDFNPTGLQTRNNNVKIMAI STYNVSSSSGLKTRVGSTNLTTIPVYKIEFLSDEGKGVAYVPADERFAKIMAYLPKTDLKDSVKYVDSKSMLYLSELSLL EDAKYYEKVKSELRAKTLAKIAKTLNVKAVRYDEIQDIIIVKDEILSRSEPTFPIGNPIGFAGLYCSSTEWNQDAPYNDL LQKENCDLYDTGSPTYEAVPAGCAVISIAQIMASLEPDLTVDGLKIDWNILKAQKQIIAPSSWQTPSSETTREMVAKLIK YIYIATNTQPVRNSSGYVTGSGTYSSDTSSFFYRFFSTSGLKNGWDGNAAFQSLQLAKLVWIAATSNRGGSHAFILDGFA YWRPQTRYLVKNFDFYFHANMGWGGYYDGFYLVNKDLSITFDTSNGSYDRNFSMIYNIINK >Mature_461_residues MKLKYYFLLVILALFTSCSNELGMQDNLNDSKILLSSDEYISIAYDNPGIITSEEAKQLVLDFNPTGLQTRNNNVKIMAI STYNVSSSSGLKTRVGSTNLTTIPVYKIEFLSDEGKGVAYVPADERFAKIMAYLPKTDLKDSVKYVDSKSMLYLSELSLL EDAKYYEKVKSELRAKTLAKIAKTLNVKAVRYDEIQDIIIVKDEILSRSEPTFPIGNPIGFAGLYCSSTEWNQDAPYNDL LQKENCDLYDTGSPTYEAVPAGCAVISIAQIMASLEPDLTVDGLKIDWNILKAQKQIIAPSSWQTPSSETTREMVAKLIK YIYIATNTQPVRNSSGYVTGSGTYSSDTSSFFYRFFSTSGLKNGWDGNAAFQSLQLAKLVWIAATSNRGGSHAFILDGFA YWRPQTRYLVKNFDFYFHANMGWGGYYDGFYLVNKDLSITFDTSNGSYDRNFSMIYNIINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51670; Mature: 51670
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKYYFLLVILALFTSCSNELGMQDNLNDSKILLSSDEYISIAYDNPGIITSEEAKQLV CEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEECCCCCEEE LDFNPTGLQTRNNNVKIMAISTYNVSSSSGLKTRVGSTNLTTIPVYKIEFLSDEGKGVAY EEECCCCCEECCCCEEEEEEEEECCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCEEEE VPADERFAKIMAYLPKTDLKDSVKYVDSKSMLYLSELSLLEDAKYYEKVKSELRAKTLAK ECCHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKTLNVKAVRYDEIQDIIIVKDEILSRSEPTFPIGNPIGFAGLYCSSTEWNQDAPYNDL HHHHHCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH LQKENCDLYDTGSPTYEAVPAGCAVISIAQIMASLEPDLTVDGLKIDWNILKAQKQIIAP HHHCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHCCCCCEECCEEEEHHHHHHHHHHCCC SSWQTPSSETTREMVAKLIKYIYIATNTQPVRNSSGYVTGSGTYSSDTSSFFYRFFSTSG CCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC LKNGWDGNAAFQSLQLAKLVWIAATSNRGGSHAFILDGFAYWRPQTRYLVKNFDFYFHAN CCCCCCCHHHHHHHHEEEEEEEEEECCCCCCEEEEECCHHHCCCCCEEEEEECEEEEEEC MGWGGYYDGFYLVNKDLSITFDTSNGSYDRNFSMIYNIINK CCCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKLKYYFLLVILALFTSCSNELGMQDNLNDSKILLSSDEYISIAYDNPGIITSEEAKQLV CEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEECCCCCEEE LDFNPTGLQTRNNNVKIMAISTYNVSSSSGLKTRVGSTNLTTIPVYKIEFLSDEGKGVAY EEECCCCCEECCCCEEEEEEEEECCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCEEEE VPADERFAKIMAYLPKTDLKDSVKYVDSKSMLYLSELSLLEDAKYYEKVKSELRAKTLAK ECCHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKTLNVKAVRYDEIQDIIIVKDEILSRSEPTFPIGNPIGFAGLYCSSTEWNQDAPYNDL HHHHHCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH LQKENCDLYDTGSPTYEAVPAGCAVISIAQIMASLEPDLTVDGLKIDWNILKAQKQIIAP HHHCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHCCCCCEECCEEEEHHHHHHHHHHCCC SSWQTPSSETTREMVAKLIKYIYIATNTQPVRNSSGYVTGSGTYSSDTSSFFYRFFSTSG CCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCC LKNGWDGNAAFQSLQLAKLVWIAATSNRGGSHAFILDGFAYWRPQTRYLVKNFDFYFHAN CCCCCCCHHHHHHHHEEEEEEEEEECCCCCCEEEEECCHHHCCCCCEEEEEECEEEEEEC MGWGGYYDGFYLVNKDLSITFDTSNGSYDRNFSMIYNIINK CCCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA