| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347621
Identifier: 29347621
GI number: 29347621
Start: 2778788
End: 2780098
Strand: Reverse
Name: 29347621
Synonym: BT_2211
Alternate gene names: NA
Gene position: 2780098-2778788 (Counterclockwise)
Preceding gene: 29347622
Following gene: 29347614
Centisome position: 44.41
GC content: 47.44
Gene sequence:
>1311_bases TTGTACTTAACCCGTCGTTTCTATATTGCCCTTATTCTGGTTATCCTCTTATTGGGTAGCGGATATCTGTTTGCTCCGTT TTTTGTCATCGGGCAGTGGGCGCTTTTTGCCTTATTCGTGTTGGTATCGGCAGATGGATATATTCTCTACCGTACCCAGG GGATTCAGGCATTCCGTCGATGTTCCGACCGTTTCTCCAATGGCGATGACAATGAAGTGAGCATTCGTGTCGAAAGTACT TATTCGCGTCCTCTCTCTCTGGAGATCATAGATGAAATACCTTTTATCTTCCAGAATCGGGATGTCTGTTTCCGGACTAC CCTTCAGCCGAACGAGGGGAAAACAATCAGTTACCATCTTCGTCCGACCCGTCGCGGAGTATACTCTTTCGGGCAAATCC GTGTATTTGTGACCGATAAAATCGGGCTGCTTTCCCGTCGGTACACTTGTGGGCAGGCGCAGGATATCAAGGTATATCCT TCCTATCTGATGCTTCACCGATACGAATTGCTGGCAATGAGTGATAATCTTACCGAACTGGGTATCAAGCGTATCCGCCG GGTAGGCCATCAAACGGAATTTGAGCAGATCAAGGAATATGTAAAAGGAGACGACTACCGGACTATCAACTGGAAAGCGA GTGCCCGCCGGCATGAGTTGATGGTAAATGTCTATCAGGACGAACGCTCTCAGCAGATTTACAGTGTGATAGATAAAGGC AGGGTGATGCAGCAGGCTTTTCGGGGAATGACTTTGCTCGATTATGCGATTAATGCTTCGCTGGTGCTTTCGTATGTGGC GATGCGGAAGGAGGATAAAGCGGGGCTGGTGACTTTTGATGAGCATTTTGATACCTTCGTTCCGGCTTCCAAGCAGCCCG GGCATATGCAGACGCTGCTTGAAAAGCTGTATAGCCAGCAGACTACTTTTGGTGAAACGGACTTCTCGGCTCTTTGTGTG CATCTGAACAAGCACGTCAATAAGCGTAGCTTTTTGGTTCTGTATACCAACTTTGCCAGTATCAGCAGCATGAATCGCCA GTTGGCTTACTTGCAGCAGCTCAACCGGCAACATCGTTTGCTGGTGGTTTTCTTTGAGGATGCTGACTTGAAAGCGTACA TCGAAAGTCCGGCGAGGGATACGGAAGATTATTACCGGCACGTGATTGCCGAAAAGTTTGCTTTTGAGAAGCGACTGATC GTTTCTACATTAAAGCAGCATGGCATTTACTCTCTGCTGACGACACCCGAAAATCTGTCTATTGACGTGATCAATAAATA TCTGGAGATGAAATCACGGCAACTGCTATGA
Upstream 100 bases:
>100_bases TTACGCAACGCCTGATTGATAAAGTGGAGGTCCCCAAATAAGAACCGAATCTCTATAATTCGTAACTCAAAACTTAAAAC TCAAAACTCAGAACCCGAAA
Downstream 100 bases:
>100_bases TAAGTCTTTAATAATATTTTCTACTGTTTCTTTTAAAGGAGGAAGGTGCTTTGTTATGACTACCCATATAATCTCATAGT CAATGTTGGCATATTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MYLTRRFYIALILVILLLGSGYLFAPFFVIGQWALFALFVLVSADGYILYRTQGIQAFRRCSDRFSNGDDNEVSIRVEST YSRPLSLEIIDEIPFIFQNRDVCFRTTLQPNEGKTISYHLRPTRRGVYSFGQIRVFVTDKIGLLSRRYTCGQAQDIKVYP SYLMLHRYELLAMSDNLTELGIKRIRRVGHQTEFEQIKEYVKGDDYRTINWKASARRHELMVNVYQDERSQQIYSVIDKG RVMQQAFRGMTLLDYAINASLVLSYVAMRKEDKAGLVTFDEHFDTFVPASKQPGHMQTLLEKLYSQQTTFGETDFSALCV HLNKHVNKRSFLVLYTNFASISSMNRQLAYLQQLNRQHRLLVVFFEDADLKAYIESPARDTEDYYRHVIAEKFAFEKRLI VSTLKQHGIYSLLTTPENLSIDVINKYLEMKSRQLL
Sequences:
>Translated_436_residues MYLTRRFYIALILVILLLGSGYLFAPFFVIGQWALFALFVLVSADGYILYRTQGIQAFRRCSDRFSNGDDNEVSIRVEST YSRPLSLEIIDEIPFIFQNRDVCFRTTLQPNEGKTISYHLRPTRRGVYSFGQIRVFVTDKIGLLSRRYTCGQAQDIKVYP SYLMLHRYELLAMSDNLTELGIKRIRRVGHQTEFEQIKEYVKGDDYRTINWKASARRHELMVNVYQDERSQQIYSVIDKG RVMQQAFRGMTLLDYAINASLVLSYVAMRKEDKAGLVTFDEHFDTFVPASKQPGHMQTLLEKLYSQQTTFGETDFSALCV HLNKHVNKRSFLVLYTNFASISSMNRQLAYLQQLNRQHRLLVVFFEDADLKAYIESPARDTEDYYRHVIAEKFAFEKRLI VSTLKQHGIYSLLTTPENLSIDVINKYLEMKSRQLL >Mature_436_residues MYLTRRFYIALILVILLLGSGYLFAPFFVIGQWALFALFVLVSADGYILYRTQGIQAFRRCSDRFSNGDDNEVSIRVEST YSRPLSLEIIDEIPFIFQNRDVCFRTTLQPNEGKTISYHLRPTRRGVYSFGQIRVFVTDKIGLLSRRYTCGQAQDIKVYP SYLMLHRYELLAMSDNLTELGIKRIRRVGHQTEFEQIKEYVKGDDYRTINWKASARRHELMVNVYQDERSQQIYSVIDKG RVMQQAFRGMTLLDYAINASLVLSYVAMRKEDKAGLVTFDEHFDTFVPASKQPGHMQTLLEKLYSQQTTFGETDFSALCV HLNKHVNKRSFLVLYTNFASISSMNRQLAYLQQLNRQHRLLVVFFEDADLKAYIESPARDTEDYYRHVIAEKFAFEKRLI VSTLKQHGIYSLLTTPENLSIDVINKYLEMKSRQLL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50926; Mature: 50926
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLTRRFYIALILVILLLGSGYLFAPFFVIGQWALFALFVLVSADGYILYRTQGIQAFRR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH CSDRFSNGDDNEVSIRVESTYSRPLSLEIIDEIPFIFQNRDVCFRTTLQPNEGKTISYHL HHHHCCCCCCCEEEEEEECCCCCCEEEEEHHHCCHHCCCCCEEEEEEECCCCCCEEEEEE RPTRRGVYSFGQIRVFVTDKIGLLSRRYTCGQAQDIKVYPSYLMLHRYELLAMSDNLTEL CCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCEECHHHHHHHHHHHEEECCCHHHH GIKRIRRVGHQTEFEQIKEYVKGDDYRTINWKASARRHELMVNVYQDERSQQIYSVIDKG HHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHEEEEHHHHHHHHHHHHHHHH RVMQQAFRGMTLLDYAINASLVLSYVAMRKEDKAGLVTFDEHFDTFVPASKQPGHMQTLL HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCCCCCHHHHHH EKLYSQQTTFGETDFSALCVHLNKHVNKRSFLVLYTNFASISSMNRQLAYLQQLNRQHRL HHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCE LVVFFEDADLKAYIESPARDTEDYYRHVIAEKFAFEKRLIVSTLKQHGIYSLLTTPENLS EEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC IDVINKYLEMKSRQLL HHHHHHHHHHHHHCCC >Mature Secondary Structure MYLTRRFYIALILVILLLGSGYLFAPFFVIGQWALFALFVLVSADGYILYRTQGIQAFRR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH CSDRFSNGDDNEVSIRVESTYSRPLSLEIIDEIPFIFQNRDVCFRTTLQPNEGKTISYHL HHHHCCCCCCCEEEEEEECCCCCCEEEEEHHHCCHHCCCCCEEEEEEECCCCCCEEEEEE RPTRRGVYSFGQIRVFVTDKIGLLSRRYTCGQAQDIKVYPSYLMLHRYELLAMSDNLTEL CCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCEECHHHHHHHHHHHEEECCCHHHH GIKRIRRVGHQTEFEQIKEYVKGDDYRTINWKASARRHELMVNVYQDERSQQIYSVIDKG HHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHEEEEHHHHHHHHHHHHHHHH RVMQQAFRGMTLLDYAINASLVLSYVAMRKEDKAGLVTFDEHFDTFVPASKQPGHMQTLL HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCCCCCHHHHHH EKLYSQQTTFGETDFSALCVHLNKHVNKRSFLVLYTNFASISSMNRQLAYLQQLNRQHRL HHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCE LVVFFEDADLKAYIESPARDTEDYYRHVIAEKFAFEKRLIVSTLKQHGIYSLLTTPENLS EEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC IDVINKYLEMKSRQLL HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA