Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347614

Identifier: 29347614

GI number: 29347614

Start: 2773161

End: 2775734

Strand: Reverse

Name: 29347614

Synonym: BT_2204

Alternate gene names: NA

Gene position: 2775734-2773161 (Counterclockwise)

Preceding gene: 29347621

Following gene: 29347613

Centisome position: 44.34

GC content: 42.66

Gene sequence:

>2574_bases
ATGATACGACGTAGGCTTTGCCTCTTATTCCTACTGACTGGAATGACTCTGTTTGCTTATTCGCAAGGATTGTTGTTTCA
GGCTAATGATAAAGAAATTAAAGAAAGGACTTCTCTTCAGATATTTCAGGAAGGGGAGATACCTTGTTTTACGAAAAACT
TTCAGTTGAGCTTTGAACTTTCTATTCGCGATTTTGATACTTTTGGATATGTTTTTCTGCTGAAGGAAGATCAGGGGAAA
ACTAAATATAGCTTTACGTATACTTATCTGGATGGTGAGAACAGTACATTCAAGTTTAATACCGACGGAAAAGAGAATCA
TTATTCTTTAAATCTGCGCAATGATGCACTGGCTTATCAATGGATTCCTGTGTCTTTTGCATTCGATTTGCAACAGGACG
TACTTACGATTCGTATCGGAGATAACGAAAAGAAGATTACTTCTTTAGGATTGAAAGATACTTTTTGTCCGCACCTCTTC
TTCGGACGTTATGATTATATTTTGGATATGCCCACTTTTGCCATCCGCAATCTGAAGCTGGAAGGTGATAGAAGTCATTC
ATATACTTTCCCTCTGAATGAAAATGAAGGGGAAGAAGTGCATACTTCTACAGGGAAGGTTTTGGGTACGGTTGTCAATC
CGGTGTGGCTCATCAACGGTTCTTATCATTGGGAGAAACTTTTTGAGTATTCTTTTCAGACTCCTTCGGGAATCACTTTT
GAGCCGGACAGTCAGCGACTGATTATTTTCAGCCAGGATTCACTTCTTACTTATAATCTGTTGAAACGTCAGCCACAAAA
GTATTCTTATAGCAACAAACTACCCGTAAAATTGCAGTTGGCTACTCATTTCATGAATACAACGGATGGTAAACTTTATG
TTTATGAATTGAATAACCTGCCGTTGGGGGATGCTACGGTAGCGGCGCTCGATCTGAATAATCAGGAGTGGAAACAGACC
GGAGTAGCAGCCTTGCCGGTACAGTTGCACCATCATGACGGCTTTTGGGATGAAACAACCGGAAAGTATCTCGTTTTTGG
CGGTTTTGGTAATAAGCGTTTTAACAATACATTCCTCGAATATGATATCGAGGCCGACCGTTGGGACACCCTCTCTTATT
CCGGCGACCGGATTATCCCCCGTTATTTCTCGGGTATGGCAGTCAATAAGAACCGGGAGCATATCTATGTCTTTGGCGGG
ATGGGAAACGAATCGGGTGAGCAGAGTGTAGGCCGAAATTATCTTCACGATCTTTATCTGCTTGACAGAAAGCAGCAGTC
TGTGCGACGTTTGTGGCAGAACGCTTCGGATCATCGTTTGGTCGTCGCCCGTGATATGATACTGACACCTGATGAGAAGT
ATATCTATGCCCTGTGTTATCCGGAATATCTTTCGGATACCTATCTGCAACTTTATCGCTTGACGGTTGATGATGGAACG
ATGAAAGCTTTGGGAGATTCCATTCCGATGCGTTCGGAAGAGATTATGACGAATGCTAACCTTTACTATAATTCATTGAC
GCATGAGTATTACTGTACGACCACAGAATTTGACAAGAAGGGGCATACGGTGATTCGGACTTATGTGTTGTCCGCCCCTC
CGGTTTCTCTGGATGAAATCCGTTCTTACGGCTCCAGGTCTTCTCTGGAGATTCGTTGGTTATGGATAATGGCAGGAATA
GGAGTATTATTGCTTGTCGGAGGTGTGCTGTTTGTCAGGAGAAAGAGGGGAAAACAAAGAAATGCGGTTCCGGAATCATC
TTCTGTGCTCATGTCACCACCTGTCGGAAGAGAACCGGATAAAAGTGTACTGGGAAAAGAAATGCCTGCAAAAGAAGATT
TTGAATCATCCATCGTTCGTCCGAATGCAGTTTATTTATTCGGTCCTTTTACGGTAATTGACCGGAATGGGCGGGATATT
ACTCATTTGTTCAGTTCCCGTTTACGGCAGGTTTTCATCTATATCTTGCTTCATAGTACCCATAATGGAGTATTATCTGC
CTCCTTGAATGAGGTTTTCTGGGCCGATAAACCCGACGACAAGGTGAAAAACCTGAAAGGGGTAACGATCAATCAGATTC
GCAAAAATCTGGCTGAGCTGGATGGAGTGGAACTTGTACACGACAAGGGATATTTCAGACTGGTGTTTACTGACTGTTAT
TGTGATTATTTCCGTTTCCGCACCTTGAAGAATGCTGAAGAGGTGGAGAATGAACTCGGCATTTTATTAATGCGTGGCAA
ATTCCTTGATGGTATGGATGCGGGGATGATGGACCACTTCAAACAAAAAGTAGAAGAGTTCTTGTCTTCCTTTCTGCCAC
TGGAAATCGAACGTCTGTATCAGCAGCATAAGTATGATGCCGTCATTCGTTTCTGTAATGTGCTTTTCCGGGTTGATCCG
GTTAATGAGCTGGCACTGGCCTATGGTATGCATGCCCTTAACCATACAGGTTCGTCACAAGAAGCAATTCTGCAATATTC
CCTGTTTGTGCGTGAGTACAAGCAAATGATGAATGAAGAATATTCTACTTCTTATGCAGAGCTGATGAGCAAAAATCCTC
CTTTTCATCGATAA

Upstream 100 bases:

>100_bases
AAACAGCCGGAACTGTAGGGTACCGACAAAGGTGATTTTCATCTGCTTAGGCGGTTATTTAAAATAATCCTGTATATTTG
TGATAATAAATCGAAAGACT

Downstream 100 bases:

>100_bases
AAACATATCGGTTAATGATATTTATTCGCTTATTAATCCGTTATTAACCCATCACTAATAAGTTGTTTAACCTTGCTACA
TTATGTTTGCAGCGATGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 857; Mature: 857

Protein sequence:

>857_residues
MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK
TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF
FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF
EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT
GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG
MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT
MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI
GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI
THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY
CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP
VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR

Sequences:

>Translated_857_residues
MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK
TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF
FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF
EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT
GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG
MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT
MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI
GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI
THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY
CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP
VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR
>Mature_857_residues
MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK
TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF
FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF
EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT
GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG
MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT
MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI
GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI
THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY
CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP
VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99284; Mature: 99284

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFEL
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCEEEEECCCCCEEEECEEEEEEE
SIRDFDTFGYVFLLKEDQGKTKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQ
EEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEE
WIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLFFGRYDYILDMPTFAIRNLKL
EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHHHCCEEEEEECCCHHEEEEEE
EGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF
ECCCCCCEEECCCCCCCCEEECCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCEE
EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNL
CCCCCEEEEEECCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCC
PLGDATVAALDLNNQEWKQTGVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLE
CCCCCEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEE
YDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGGMGNESGEQSVGRNYLHDLYL
EECCCCCCCEECCCCCEECHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT
HHHHHHHHHHHHCCCCCCEEEEEECEEECCCCCEEEEEECHHHHCCCEEEEEEEEECCCH
MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEI
HHHHCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHH
RSYGSRSSLEIRWLWIMAGIGVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPD
HCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCC
KSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDITHLFSSRLRQVFIYILLHST
HHHHCCCCCCCCCHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHEEEEEEECC
HNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY
CCCEEEECHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEHHH
CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLY
HHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
QQHKYDAVIRFCNVLFRVDPVNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEE
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YSTSYAELMSKNPPFHR
HCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFEL
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCEEEEECCCCCEEEECEEEEEEE
SIRDFDTFGYVFLLKEDQGKTKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQ
EEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEE
WIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLFFGRYDYILDMPTFAIRNLKL
EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHHHCCEEEEEECCCHHEEEEEE
EGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF
ECCCCCCEEECCCCCCCCEEECCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCEE
EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNL
CCCCCEEEEEECCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCC
PLGDATVAALDLNNQEWKQTGVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLE
CCCCCEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEE
YDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGGMGNESGEQSVGRNYLHDLYL
EECCCCCCCEECCCCCEECHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT
HHHHHHHHHHHHCCCCCCEEEEEECEEECCCCCEEEEEECHHHHCCCEEEEEEEEECCCH
MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEI
HHHHCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHH
RSYGSRSSLEIRWLWIMAGIGVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPD
HCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCC
KSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDITHLFSSRLRQVFIYILLHST
HHHHCCCCCCCCCHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHEEEEEEECC
HNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY
CCCEEEECHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEHHH
CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLY
HHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
QQHKYDAVIRFCNVLFRVDPVNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEE
HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YSTSYAELMSKNPPFHR
HCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA