| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347613
Identifier: 29347613
GI number: 29347613
Start: 2771962
End: 2772915
Strand: Reverse
Name: 29347613
Synonym: BT_2203
Alternate gene names: NA
Gene position: 2772915-2771962 (Counterclockwise)
Preceding gene: 29347614
Following gene: 29347612
Centisome position: 44.29
GC content: 44.76
Gene sequence:
>954_bases ATGTACACGCATCTGACCGACATGACAAACATGCTTGATACCGCAAAGATCGGTACAAGTGACGGTACTTTCCCATTGGC AAATGCCCAGAACCTGCAAAAAGCTGTCGAAGAACTGCAAACAGGTATTTCTAAAGGTATGGCTGGCTACTTTGTTCTAC AGTATGAAATAGATAACTACTGTATAGCCGCCGAAAAAGCGATTGCCGAATTTCAGGATTCCTATCAACAGACATTGCAA CCGGGTACGCCTGCCGAATTAAAGGTATTCGGCATTGACGGTAAAGGGCGTATTGAATTTGGTTCCGATCCTGCTTATGG TGGCGGTAATACTTTCACCGTAGAAAGTTGGGTGAAGTATGATGCCGGTTTCTTTGAGTCGGGAATTGGCAGTTTCCTCT CTACTTTTGACGGTAAGCAGCCGAATGAGGGATGGATGATCAACTTCTTAGGCTCTAATCTTCGTACAACGATCGGTATG GGACCGCAGGAAGGCCGCGTACTGGAAGAAGGCCGTGCTTATCCTGATAATTTTGGTAAATGGAATCATGTCGTGACGGT GTGGGATAACACCTTGCCTGAAGGACAGCTGAAAATGTATGTCAATGGTGAATTATTCTTCAGTAAGACAAATGATGTGA AGAATGATGCCGGAGTATTACAGAATTATATGCCTAACACCCGTAACCAGAATATGTGGGCATTCCAGGAACCGACTGAC AATTCACGCTGTATGACCGGATTTATTAAGAAATTCCGCATGTGGAGTACTGCGAAATCGGCGAATGAGGTAAAAACGCT GATGAACTCGGATGTGACGGGAACAGAAAGCGGACTGGTATGTGCGTGGGACTTCACGACAGTGGTCGAAGACGTTACCA ACATTCCGGATAAGACAGGAAAACACGTTGCGAAAATTGTAGGTAACTACAAATGGTTTAAAGTTGAGAACTAA
Upstream 100 bases:
>100_bases ATTCTTTATGAAACTTTGTTTATTCAGTTTGTTGGTTTGGTGTGTCAGCTCGTGCAAGAGCGATAACGGCGATTCAGTGC GGCCTATTGCACTTGAATGC
Downstream 100 bases:
>100_bases CCTTAATAAACAGACGAAGAGTATGAAAAATAATACGATAAAAATAAAGGCTTTCCTCTGCCTGCTGCTTCTGATGTGCG GATGGGTAAGTGTGCAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYTHLTDMTNMLDTAKIGTSDGTFPLANAQNLQKAVEELQTGISKGMAGYFVLQYEIDNYCIAAEKAIAEFQDSYQQTLQ PGTPAELKVFGIDGKGRIEFGSDPAYGGGNTFTVESWVKYDAGFFESGIGSFLSTFDGKQPNEGWMINFLGSNLRTTIGM GPQEGRVLEEGRAYPDNFGKWNHVVTVWDNTLPEGQLKMYVNGELFFSKTNDVKNDAGVLQNYMPNTRNQNMWAFQEPTD NSRCMTGFIKKFRMWSTAKSANEVKTLMNSDVTGTESGLVCAWDFTTVVEDVTNIPDKTGKHVAKIVGNYKWFKVEN
Sequences:
>Translated_317_residues MYTHLTDMTNMLDTAKIGTSDGTFPLANAQNLQKAVEELQTGISKGMAGYFVLQYEIDNYCIAAEKAIAEFQDSYQQTLQ PGTPAELKVFGIDGKGRIEFGSDPAYGGGNTFTVESWVKYDAGFFESGIGSFLSTFDGKQPNEGWMINFLGSNLRTTIGM GPQEGRVLEEGRAYPDNFGKWNHVVTVWDNTLPEGQLKMYVNGELFFSKTNDVKNDAGVLQNYMPNTRNQNMWAFQEPTD NSRCMTGFIKKFRMWSTAKSANEVKTLMNSDVTGTESGLVCAWDFTTVVEDVTNIPDKTGKHVAKIVGNYKWFKVEN >Mature_317_residues MYTHLTDMTNMLDTAKIGTSDGTFPLANAQNLQKAVEELQTGISKGMAGYFVLQYEIDNYCIAAEKAIAEFQDSYQQTLQ PGTPAELKVFGIDGKGRIEFGSDPAYGGGNTFTVESWVKYDAGFFESGIGSFLSTFDGKQPNEGWMINFLGSNLRTTIGM GPQEGRVLEEGRAYPDNFGKWNHVVTVWDNTLPEGQLKMYVNGELFFSKTNDVKNDAGVLQNYMPNTRNQNMWAFQEPTD NSRCMTGFIKKFRMWSTAKSANEVKTLMNSDVTGTESGLVCAWDFTTVVEDVTNIPDKTGKHVAKIVGNYKWFKVEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35337; Mature: 35337
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTHLTDMTNMLDTAKIGTSDGTFPLANAQNLQKAVEELQTGISKGMAGYFVLQYEIDNY CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCE CIAAEKAIAEFQDSYQQTLQPGTPAELKVFGIDGKGRIEFGSDPAYGGGNTFTVESWVKY EEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEHHHHHH DAGFFESGIGSFLSTFDGKQPNEGWMINFLGSNLRTTIGMGPQEGRVLEEGRAYPDNFGK CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCC WNHVVTVWDNTLPEGQLKMYVNGELFFSKTNDVKNDAGVLQNYMPNTRNQNMWAFQEPTD CCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC NSRCMTGFIKKFRMWSTAKSANEVKTLMNSDVTGTESGLVCAWDFTTVVEDVTNIPDKTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCH KHVAKIVGNYKWFKVEN HHHHHHHCCCEEEEECC >Mature Secondary Structure MYTHLTDMTNMLDTAKIGTSDGTFPLANAQNLQKAVEELQTGISKGMAGYFVLQYEIDNY CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCE CIAAEKAIAEFQDSYQQTLQPGTPAELKVFGIDGKGRIEFGSDPAYGGGNTFTVESWVKY EEHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEHHHHHH DAGFFESGIGSFLSTFDGKQPNEGWMINFLGSNLRTTIGMGPQEGRVLEEGRAYPDNFGK CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHCCCCCCCCCCC WNHVVTVWDNTLPEGQLKMYVNGELFFSKTNDVKNDAGVLQNYMPNTRNQNMWAFQEPTD CCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCC NSRCMTGFIKKFRMWSTAKSANEVKTLMNSDVTGTESGLVCAWDFTTVVEDVTNIPDKTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCH KHVAKIVGNYKWFKVEN HHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA