| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347605
Identifier: 29347605
GI number: 29347605
Start: 2755560
End: 2757302
Strand: Reverse
Name: 29347605
Synonym: BT_2195
Alternate gene names: NA
Gene position: 2757302-2755560 (Counterclockwise)
Preceding gene: 29347606
Following gene: 29347604
Centisome position: 44.04
GC content: 44.98
Gene sequence:
>1743_bases ATGAGAATACATAATATAATAAAAACAGTTTGCCTGGCAGGCTCATTAGCCTTGCTGTCTGCCTGTGAAGACTGGCTTGA AATAGAGCCGAAAGACCGTTTTGGAGATACAACGGTCTGGGGATCGGAAGAAAATGCCGATATGTTTCTGAATGATATCT ATAATCAGTTGCCGCATCTGAACAATGAAACACAGAATCTGGACCAATATTCGGATAATTCATACGTAGGTGCGGAATGG ATGAATGCCCGTACAACGATTTATACCGGAGCATTATCTCCTACCAGCTGGATACCCGGCCCCTGGGATATGTGGAAATG GGGACGTCAGAATAATGACGACGCCAAAGGACAGTATGAGCGTATCCGTTCCTGCAATCTTTTCATTACGAAAGTAACAG AATCCGATTTCTCGGCAGAATATAAGAAAGAACGCCTTGCAGAAGTGCGTTTCCTGCGTGCCTGGTTCTATCACTATCTT TGGATGGCGTACGGTGGTGTGCCTATCATCACGGAAGTGCTGGATAATAACGTGAGTACGGATATCTTTTATCCGCGTGA GACTGCACAGAAAACATTTGAGTTTATCGACAAAGAGTTGGACGAGATTAAAGATGATCTTCCTCCGCGCCGTAGCGGTT CCGATCTGGGGCGTGCTTCCAAAGGAGCAATTCTGACACTGAAAGGATGGGTGGAACTGTTTCATGCCAGTGAATTGCGT AATCCGGGCAAAGACAAGAAACGCTGGGAAGCAGCTGCGGCTACCTTGAAAGATGTAATTGACTTACAGGTCTATCATCT GCAACCGACTATTTTGGACCTTTGGACAGAAGCTACCAACAATAACGATGAAGTGATCTTCGACTTCCAGATGTCTAAGC AGAATGGAGGGCGTCGTGAAGGTCTGTTCGGTCCGGTGTTTGTAAAAGGAGTACAGTCCAGTTGGGGAAATATGCAGCCT ACACAGGAACTGGTTGACGACTATTGCATGGCCAACGGATTGCCTATCACTGATCCTGCATCCGGTTACAATAAGAATAA TCCTTATAAAAATCGTGAGAAACGCTTCTACCAGAGCATCCTGTATGATGGATCTATGTGGCAGGGGGAAGAGATTATTA CTCGTGTAGGAGTAGGTAGTCCCAATGAGATTGATACTTCTTCGGATAGTGACGTTACGAATACGGGATACTACACTCGT AAAACGATTGATGAATCCGTGAATGGAGCGGACAATCTGCAAATGAGCAACGGAATGGCAAATTATATTTTCTTCCGTTA TGCAGATGTGTTGCTGATGTATGCAGAAGCTTCTTTGGAAGCGGGAGATAAACCGACTGCCATCGAATATCTGGATATGG TGAGAACACGTGGAGATAATATGCCTTCTATCGGCGATACTTATCCGCAGGGAATCACAGAAAATCAGTTGCGGGAAATC ATTCGGAGAGATCGCCGTATAGAATTGGCATTTGAAGATAAGCGTTGGTGGGACATTCTTCGCTGGAAGATTTGTGATGG TGAAAACGGAGTGATGAATAAACCGATTGGTGGTATGAAGATAGAAGATACCAATGGAGATGGTGTGTGGGAATACAATT ATCATGAAGTTGGTAAACGTACCTTCCTGCCACGTATGTATTATCAGCCCATTCCGCAGTATGTGATAGACAAGAATCCG GTGATCCGCGAGCAAAATGGTGGTGAAGACGGATGGGTAAACGGGCAGAATCCCGGATATTAA
Upstream 100 bases:
>100_bases GCCAAATCCGCTAATGGTAAATACTATATGCAGCAGGCTGTATATGCTTTTGGTTTGAATATTACTTTTTAATTAGTTAA CCATCATAACAAGATAGAAT
Downstream 100 bases:
>100_bases TAAAGAATGTAAACCTTGAAAGATTATTCGTATGAAACTAAATAGATTTGTCATGGCGGCAAGTGCGGTACTTTGTTCGT TTGCCTTGCTGAGTGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP VIREQNGGEDGWVNGQNPGY
Sequences:
>Translated_580_residues MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP VIREQNGGEDGWVNGQNPGY >Mature_580_residues MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHLNNETQNLDQYSDNSYVGAEW MNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYERIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYL WMAYGGVPIITEVLDNNVSTDIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRREGLFGPVFVKGVQSSWGNMQP TQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSILYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTR KTIDESVNGADNLQMSNGMANYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKRTFLPRMYYQPIPQYVIDKNP VIREQNGGEDGWVNGQNPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66712; Mature: 66712
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCC NNETQNLDQYSDNSYVGAEWMNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYE CCCHHHHHHCCCCCEECHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH RIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYLWMAYGGVPIITEVLDNNVST HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC DIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHC NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRRE CCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC GLFGPVFVKGVQSSWGNMQPTQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSI CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTRKTIDESVNGADNLQMSNGMA HCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCEECCCCH NYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKR HHHCCEEEEEECCCHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHH TFLPRMYYQPIPQYVIDKNPVIREQNGGEDGWVNGQNPGY HHCCHHHHCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIHNIIKTVCLAGSLALLSACEDWLEIEPKDRFGDTTVWGSEENADMFLNDIYNQLPHL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCC NNETQNLDQYSDNSYVGAEWMNARTTIYTGALSPTSWIPGPWDMWKWGRQNNDDAKGQYE CCCHHHHHHCCCCCEECHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH RIRSCNLFITKVTESDFSAEYKKERLAEVRFLRAWFYHYLWMAYGGVPIITEVLDNNVST HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC DIFYPRETAQKTFEFIDKELDEIKDDLPPRRSGSDLGRASKGAILTLKGWVELFHASELR CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHC NPGKDKKRWEAAAATLKDVIDLQVYHLQPTILDLWTEATNNNDEVIFDFQMSKQNGGRRE CCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC GLFGPVFVKGVQSSWGNMQPTQELVDDYCMANGLPITDPASGYNKNNPYKNREKRFYQSI CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LYDGSMWQGEEIITRVGVGSPNEIDTSSDSDVTNTGYYTRKTIDESVNGADNLQMSNGMA HCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCEECCCCH NYIFFRYADVLLMYAEASLEAGDKPTAIEYLDMVRTRGDNMPSIGDTYPQGITENQLREI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IRRDRRIELAFEDKRWWDILRWKICDGENGVMNKPIGGMKIEDTNGDGVWEYNYHEVGKR HHHCCEEEEEECCCHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHH TFLPRMYYQPIPQYVIDKNPVIREQNGGEDGWVNGQNPGY HHCCHHHHCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA