Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is yfbL [C]

Identifier: 29347599

GI number: 29347599

Start: 2746623

End: 2747645

Strand: Reverse

Name: yfbL [C]

Synonym: BT_2189

Alternate gene names: 29347599

Gene position: 2747645-2746623 (Counterclockwise)

Preceding gene: 29347600

Following gene: 29347593

Centisome position: 43.89

GC content: 44.48

Gene sequence:

>1023_bases
ATGGACTCTAAATTATATACCACGATGAAACAAAGAATTATATTATTCGGATTAATACTTGTAGGAACAGTAACTTTTGC
ACAGTCTCCCGAAGAAAAGGGCTTGAACACGATCAACCGTTCTTCTGCCGAAGCAACAATCGGTTTCCTTGCAAGTGATG
AATTACAGGGACGTGAAGCCGGATTCCACGGTTCGTATGTCTCCTCTGAGTATATAGCATCTATCTTACAATGGATGGGA
ATCCAACCTCTGAACGAAAGCTACTTCCAGCCTTTTGATGCTTACCGCAAAGAGCGTCAGAAGAAAGGACGTCTGGAAGT
TCATCCGGACTCTGTAGCGAAGCTGAAACAGGAAGTTCATCAAAAACTATCTATGAGGAACGTACTGGCTATGATTCCCG
GTAAGAATACGAAGGAATATGTCATCGTAGGCGCTCACTTTGACCATTTGGGGATAGACCCGGCACTTGACGGAGATCAG
ATTTATAACGGCGCGGATGACAATGCTTCCGGTGTCTCGGCTGTATTGCAGATTGCCCGGGCATTTCTTGCAAGCGGACA
ACAACCGGAGCGAAATGTAATCTTTGCCTTTTGGGACGGAGAAGAAAAGGGATTGCTCGGTTCTAAATATTTTGTACAGA
CTTGCCCTTTTGTTTCGCAGATCAAGGGATATCTCAACTTTGATATGATAGGTCGCAACAATAAACCGGAACAACCGAAA
CATGTCGTCTATTTCTATACAGCTGCTCATCCCTCTTTTGGAGACTGGCTGAAAAAGGATATTAAGAAGTATGGTTTACA
GTTGGAACCGGACTATCGTGCCTGGGACAATCCGGTAGGGGGCAGTGACAATGGAACGTTTGCCAAAGCAGGTATTCCTA
TTATCTGGTATCATACGGACGGACATCCCGATTATCACCAGCCATCCGATCATGCTGACCGGTTAAACTGGGATAAGATA
GTGGAAATCACCAAGGCTTCTTTTCTTAATATGTGGAAGATGGCCAATGAAGCTTCATGGTAA

Upstream 100 bases:

>100_bases
GTAGAAAGAGTGAGCAGCCAAATCTTATAAAAGATGGCAACTGCTTACTCTTTTTTTGTATTTAAGGATAGATTCTGTGT
TCTTTTCGTACTTTTGTAAC

Downstream 100 bases:

>100_bases
CTCAGCCTCACTGAAAGGCTGTTTTACATCTTGCAATAAAGGGCGGAAGGAATCAGTTTGAATAACCATGCCACATATTT
CCATCTTTTGGAGATAAAGG

Product: aminopeptidase

Products: NA

Alternate protein names: SGAP [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDSKLYTTMKQRIILFGLILVGTVTFAQSPEEKGLNTINRSSAEATIGFLASDELQGREAGFHGSYVSSEYIASILQWMG
IQPLNESYFQPFDAYRKERQKKGRLEVHPDSVAKLKQEVHQKLSMRNVLAMIPGKNTKEYVIVGAHFDHLGIDPALDGDQ
IYNGADDNASGVSAVLQIARAFLASGQQPERNVIFAFWDGEEKGLLGSKYFVQTCPFVSQIKGYLNFDMIGRNNKPEQPK
HVVYFYTAAHPSFGDWLKKDIKKYGLQLEPDYRAWDNPVGGSDNGTFAKAGIPIIWYHTDGHPDYHQPSDHADRLNWDKI
VEITKASFLNMWKMANEASW

Sequences:

>Translated_340_residues
MDSKLYTTMKQRIILFGLILVGTVTFAQSPEEKGLNTINRSSAEATIGFLASDELQGREAGFHGSYVSSEYIASILQWMG
IQPLNESYFQPFDAYRKERQKKGRLEVHPDSVAKLKQEVHQKLSMRNVLAMIPGKNTKEYVIVGAHFDHLGIDPALDGDQ
IYNGADDNASGVSAVLQIARAFLASGQQPERNVIFAFWDGEEKGLLGSKYFVQTCPFVSQIKGYLNFDMIGRNNKPEQPK
HVVYFYTAAHPSFGDWLKKDIKKYGLQLEPDYRAWDNPVGGSDNGTFAKAGIPIIWYHTDGHPDYHQPSDHADRLNWDKI
VEITKASFLNMWKMANEASW
>Mature_340_residues
MDSKLYTTMKQRIILFGLILVGTVTFAQSPEEKGLNTINRSSAEATIGFLASDELQGREAGFHGSYVSSEYIASILQWMG
IQPLNESYFQPFDAYRKERQKKGRLEVHPDSVAKLKQEVHQKLSMRNVLAMIPGKNTKEYVIVGAHFDHLGIDPALDGDQ
IYNGADDNASGVSAVLQIARAFLASGQQPERNVIFAFWDGEEKGLLGSKYFVQTCPFVSQIKGYLNFDMIGRNNKPEQPK
HVVYFYTAAHPSFGDWLKKDIKKYGLQLEPDYRAWDNPVGGSDNGTFAKAGIPIIWYHTDGHPDYHQPSDHADRLNWDKI
VEITKASFLNMWKMANEASW

Specific function: Specific for larger hydrophobic acids, especially leucine. No cleavage occurs if the next residue is proline [H]

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M28 family. M28A subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320623, Length=242, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007484 [H]

Pfam domain/function: PF04389 Peptidase_M28 [H]

EC number: =3.4.11.24 [H]

Molecular weight: Translated: 38360; Mature: 38360

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKLYTTMKQRIILFGLILVGTVTFAQSPEEKGLNTINRSSAEATIGFLASDELQGREA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCHHEEEEEECCCCCCCCC
GFHGSYVSSEYIASILQWMGIQPLNESYFQPFDAYRKERQKKGRLEVHPDSVAKLKQEVH
CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
QKLSMRNVLAMIPGKNTKEYVIVGAHFDHLGIDPALDGDQIYNGADDNASGVSAVLQIAR
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
AFLASGQQPERNVIFAFWDGEEKGLLGSKYFVQTCPFVSQIKGYLNFDMIGRNNKPEQPK
HHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCC
HVVYFYTAAHPSFGDWLKKDIKKYGLQLEPDYRAWDNPVGGSDNGTFAKAGIPIIWYHTD
EEEEEEEECCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCEEECCCEEEEEECC
GHPDYHQPSDHADRLNWDKIVEITKASFLNMWKMANEASW
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSKLYTTMKQRIILFGLILVGTVTFAQSPEEKGLNTINRSSAEATIGFLASDELQGREA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCHHEEEEEECCCCCCCCC
GFHGSYVSSEYIASILQWMGIQPLNESYFQPFDAYRKERQKKGRLEVHPDSVAKLKQEVH
CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
QKLSMRNVLAMIPGKNTKEYVIVGAHFDHLGIDPALDGDQIYNGADDNASGVSAVLQIAR
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
AFLASGQQPERNVIFAFWDGEEKGLLGSKYFVQTCPFVSQIKGYLNFDMIGRNNKPEQPK
HHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCC
HVVYFYTAAHPSFGDWLKKDIKKYGLQLEPDYRAWDNPVGGSDNGTFAKAGIPIIWYHTD
EEEEEEEECCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCEEECCCEEEEEECC
GHPDYHQPSDHADRLNWDKIVEITKASFLNMWKMANEASW
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8665903; 2503378; 8444149; 9048953 [H]