| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347593
Identifier: 29347593
GI number: 29347593
Start: 2741631
End: 2742686
Strand: Reverse
Name: 29347593
Synonym: BT_2183
Alternate gene names: NA
Gene position: 2742686-2741631 (Counterclockwise)
Preceding gene: 29347599
Following gene: 29347591
Centisome position: 43.81
GC content: 46.78
Gene sequence:
>1056_bases ATGAATATACCGAATATCCGTTTACTGAATCAGCAGTTATTAAATCCACTTTTCCGTGAACCTAAAGAGTTGGTGTCTTG GATGGGAGCCATGCAGGCACAGAACTATTCCATGGTGAAGTGGGCAGTAGGGATGCGTCTGAAATCGGCTACAATTCAAA CAGTAGAGAAGGCGTTGCGTGAGGGAGAAATTCTGAGGACTCATGTGATGCGTCCTACGTGGCATCTGGTGGCGGCAGAG GATATCCGCTGGATGCTGAAACTTTCCGCGCAACGTATTATTTCGGCAAATGATTCTTTTGCGAAAGGATATGATCTGGA CATCCCGAATGAACTCTATACGAAAGCGCATGACCTGTTGGAGAAGATTCTTTGTGGAAAGAAAAGTCTGACAAAACAAG AGATTGCCGAACACTTTAACCGTTCGGGGATTGTGGCGGACAATCGCCGTATGACTCGCTTTATGGCACGTGCGGAGCAG GAAGGCATCATTTGTAGTGGCGAGGACAGAGGAAGCAAATGCACGTACGCACTTTTGGAAGAACGGGTTCCGCCGATGCC CGAACTGACGAAAGACGAGTCTTTGGCGCGCTTGGCACGGAGTTATTTCCGTAGCCATTCTCCGGCAGTTTTGCAGGATT TCATTTGGTGGTCAGGGCTGTCGGTTTCGGATGCAAAACAGGCTGTTTATCTGATTGCTTCGGAACTGATAACCGAACAA TGGAAGGAACAGACATGGTATATTCATGACATCTGCCGGACTCGTGGCAAACTGTCGGGGCATATACATCTTTTGCCTTC TTATGATGAATATCTGCTGGGATATAAAGACCGGACGGATGTTCTGCCCCTTGAACATTATTCCAAAGCGTTTACTAATA ACGGATTGTTCTTTCCGATTGTCCTTCATAACGGGCAGGTCATAGGAAACTGGGATAAATCGGTGAAGAAGAAAAGTGTG GACCTGAAGTATTCATGGTTCAGGCAGGTGGCCGATATGAATGAAGAAACGTTGGAACGGGAGCGGCAGAAATTTACCCG TTTTTTGGAAAAATAG
Upstream 100 bases:
>100_bases CCGGCGGATAAAAAAAGTTCTTTCTGCTTATCAATTAATCATTTATAATGATTTGTTAGCGAAAAGATTTTATATTTGTG GCAAATAAAATAACTAATTT
Downstream 100 bases:
>100_bases CTCTATGGGACATCGGTAAAGTGGGAGTGTTTAGTGGAAAGTTCCGTTAGGATACGGAACTGGGTTCTGTTACTATCCAT TAGCCGACGATAGTTACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNIPNIRLLNQQLLNPLFREPKELVSWMGAMQAQNYSMVKWAVGMRLKSATIQTVEKALREGEILRTHVMRPTWHLVAAE DIRWMLKLSAQRIISANDSFAKGYDLDIPNELYTKAHDLLEKILCGKKSLTKQEIAEHFNRSGIVADNRRMTRFMARAEQ EGIICSGEDRGSKCTYALLEERVPPMPELTKDESLARLARSYFRSHSPAVLQDFIWWSGLSVSDAKQAVYLIASELITEQ WKEQTWYIHDICRTRGKLSGHIHLLPSYDEYLLGYKDRTDVLPLEHYSKAFTNNGLFFPIVLHNGQVIGNWDKSVKKKSV DLKYSWFRQVADMNEETLERERQKFTRFLEK
Sequences:
>Translated_351_residues MNIPNIRLLNQQLLNPLFREPKELVSWMGAMQAQNYSMVKWAVGMRLKSATIQTVEKALREGEILRTHVMRPTWHLVAAE DIRWMLKLSAQRIISANDSFAKGYDLDIPNELYTKAHDLLEKILCGKKSLTKQEIAEHFNRSGIVADNRRMTRFMARAEQ EGIICSGEDRGSKCTYALLEERVPPMPELTKDESLARLARSYFRSHSPAVLQDFIWWSGLSVSDAKQAVYLIASELITEQ WKEQTWYIHDICRTRGKLSGHIHLLPSYDEYLLGYKDRTDVLPLEHYSKAFTNNGLFFPIVLHNGQVIGNWDKSVKKKSV DLKYSWFRQVADMNEETLERERQKFTRFLEK >Mature_351_residues MNIPNIRLLNQQLLNPLFREPKELVSWMGAMQAQNYSMVKWAVGMRLKSATIQTVEKALREGEILRTHVMRPTWHLVAAE DIRWMLKLSAQRIISANDSFAKGYDLDIPNELYTKAHDLLEKILCGKKSLTKQEIAEHFNRSGIVADNRRMTRFMARAEQ EGIICSGEDRGSKCTYALLEERVPPMPELTKDESLARLARSYFRSHSPAVLQDFIWWSGLSVSDAKQAVYLIASELITEQ WKEQTWYIHDICRTRGKLSGHIHLLPSYDEYLLGYKDRTDVLPLEHYSKAFTNNGLFFPIVLHNGQVIGNWDKSVKKKSV DLKYSWFRQVADMNEETLERERQKFTRFLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40870; Mature: 40870
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPNIRLLNQQLLNPLFREPKELVSWMGAMQAQNYSMVKWAVGMRLKSATIQTVEKALR CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGEILRTHVMRPTWHLVAAEDIRWMLKLSAQRIISANDSFAKGYDLDIPNELYTKAHDLL CCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH EKILCGKKSLTKQEIAEHFNRSGIVADNRRMTRFMARAEQEGIICSGEDRGSKCTYALLE HHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH ERVPPMPELTKDESLARLARSYFRSHSPAVLQDFIWWSGLSVSDAKQAVYLIASELITEQ HCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WKEQTWYIHDICRTRGKLSGHIHLLPSYDEYLLGYKDRTDVLPLEHYSKAFTNNGLFFPI HHHHCHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE VLHNGQVIGNWDKSVKKKSVDLKYSWFRQVADMNEETLERERQKFTRFLEK EEECCEEEECCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIPNIRLLNQQLLNPLFREPKELVSWMGAMQAQNYSMVKWAVGMRLKSATIQTVEKALR CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EGEILRTHVMRPTWHLVAAEDIRWMLKLSAQRIISANDSFAKGYDLDIPNELYTKAHDLL CCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH EKILCGKKSLTKQEIAEHFNRSGIVADNRRMTRFMARAEQEGIICSGEDRGSKCTYALLE HHHHHCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHH ERVPPMPELTKDESLARLARSYFRSHSPAVLQDFIWWSGLSVSDAKQAVYLIASELITEQ HCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WKEQTWYIHDICRTRGKLSGHIHLLPSYDEYLLGYKDRTDVLPLEHYSKAFTNNGLFFPI HHHHCHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEE VLHNGQVIGNWDKSVKKKSVDLKYSWFRQVADMNEETLERERQKFTRFLEK EEECCEEEECCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA