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The map label for this gene is uhpA [C]

Identifier: 29347591

GI number: 29347591

Start: 2739700

End: 2740473

Strand: Reverse

Name: uhpA [C]

Synonym: BT_2181

Alternate gene names: 29347591

Gene position: 2740473-2739700 (Counterclockwise)

Preceding gene: 29347593

Following gene: 29347589

Centisome position: 43.77

GC content: 46.51

Gene sequence:

>774_bases
ATGGACGTACTACAAAAGGAAATAGATGAAGTCTATGCTACGCATCCGACAGCGCACGAAGCACTGGATAATGGAATAGT
GGAACAACACCAGCAGTTTGTCCGCTCATTGACGGAAGTTAATGGAGGGTGTGCTGTCATTTCCGATCTTTCGAACCGGA
AAAGTTACGTTACTGTCCATCCGTGGGCGAATTTCCTGGGACTTACTCCCGAAGAGGCGGCTTTAAGCGTAATTGATTCG
ATGGACGAAGATTGTATCTACCGGCGCATTCATCCGGAAGATTTGGTAGAAAAGCGTTTGATGGAATACAAGTTTTTCCA
GAAGACTTTTTCCATGTCTCCCGGCGAACGGCTGAAATATCGGGGCAGATGCAGACTGCGTATGATGAATGAAAAAGGCG
TTTATCAATACATTGACAACCTTGTGCAAATCATGCAGAACACCCCTGCCGGCAATGTTTGGCTGATCTTCTGCCTTTAT
TCCTTATCTGCCGACCAACGGCCGGAACAAGGCATTTATGCTACGATAACCCAGATGGAACGTGGGGAAGTAGAAACATT
ATCCCTTTCGGAAGAGCACCGCAATATCCTTTCAGAACGCGAAAAGGAAATACTGCGCTGCATACGGAAAGGGCTGTCGA
GTAAAGAAATAGCAGCGACTCTTTATATCAGTGTGAATACGGTCAACCGCCACCGACAGAATATTTTGGAAAAACTTTCT
GTCGGCAACTCGATAGAAGCCTGTCGGGCAGCGGAGCTGATGAAATTGCTGTAA

Upstream 100 bases:

>100_bases
TTAAATGTTTCATGTTCTTTTCTTATTTATTTATCTTTGTGGTGCAAAGATAGGTCATGCCTGTCCTTGCGACAATACTG
AATAATAACCATTTTATACG

Downstream 100 bases:

>100_bases
TATTCCTTGAATTTATCCGGGATTTATCCAGATAGAGTATTTATCCAAGTAAAGATAGCAGATCATCGAGTCTTTTCACC
TGTTTCAAGCGTTCGTGTGC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein; Transcriptional Regulator GerE; LuxR Family Transcriptional Regulator GerE

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVHPWANFLGLTPEEAALSVIDS
MDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKYRGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLY
SLSADQRPEQGIYATITQMERGEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLS
VGNSIEACRAAELMKLL

Sequences:

>Translated_257_residues
MDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVHPWANFLGLTPEEAALSVIDS
MDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKYRGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLY
SLSADQRPEQGIYATITQMERGEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLS
VGNSIEACRAAELMKLL
>Mature_257_residues
MDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVHPWANFLGLTPEEAALSVIDS
MDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKYRGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLY
SLSADQRPEQGIYATITQMERGEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLS
VGNSIEACRAAELMKLL

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29575; Mature: 29575

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVH
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCEEEEC
PWANFLGLTPEEAALSVIDSMDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKY
CHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
RGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLYSLSADQRPEQGIYATITQME
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHC
RGEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLS
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHHHHHHHH
VGNSIEACRAAELMKLL
CCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEVNGGCAVISDLSNRKSYVTVH
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCEEEEC
PWANFLGLTPEEAALSVIDSMDEDCIYRRIHPEDLVEKRLMEYKFFQKTFSMSPGERLKY
CHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
RGRCRLRMMNEKGVYQYIDNLVQIMQNTPAGNVWLIFCLYSLSADQRPEQGIYATITQME
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHC
RGEVETLSLSEEHRNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLS
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHHHHHHHH
VGNSIEACRAAELMKLL
CCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA