Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347589

Identifier: 29347589

GI number: 29347589

Start: 2737773

End: 2738837

Strand: Reverse

Name: 29347589

Synonym: BT_2179

Alternate gene names: NA

Gene position: 2738837-2737773 (Counterclockwise)

Preceding gene: 29347591

Following gene: 29347585

Centisome position: 43.75

GC content: 45.35

Gene sequence:

>1065_bases
ATGAAAATAGGAGATAAGGTGCGTTTCCTCAGTGAGGTAGGCGGTGGAATCGTAACAGGATTCAAAGGAAAAGACTTTGT
ACTGGTGGAAGATGCGGATGGTTTTGATATCCCGATGCCGATACGTGAATGTGTCGTGATTGAGGCGGATGATTACAATA
TAAAACGCAAGCCTGCCGCGACAGCTCCGAAGCAGGAGGAACCCGCGAAGCCGGCCAAACCGGAAATGCCGGTTATACAG
CGCCAGCCGGAAGTGCGTGGCGGTGATACGTTGAATGTGTTTTTGGCTTATGTGCCCGAAGATGCCAAAGCGATGATGAC
TACTCCTTTCGAGGCATATTTGGTGAATGACAGCAATTACTATCTGTATTATACTTATCTGAGTGCGGAAGGAAAGGCTT
GGAACAACCGTTCACATGGACTGGTAGAGCCGAATACCAAACTGTTACTGGAAGAATTCACCAAGGATGTATTGAATGAA
ATGGAACGGGTAGCTGTCCAGCTGATCGCTTTCAAGGATGGAAAGCCTGCTGCCATCAAACCTGCTGTCAGCGTAGAGCT
GAGGATTGATACGGTGAAATTCTATAAACTGCATACATTCAGTGCTTCCGATTTCTTCGAAGAACCTGCTCTGATTTATG
ATATTGTGAAAGATGACGTGCCTGCCAAGCAGGTATATGTGTCGGCGGAAGAGATTCAGTCAGCTTTGTTGCAGAAAAAG
TTTGTGGATAAACCCAAGTCGCAGCCTATTATGAAGCCCAACCACGGTCAGAGCGGAAAAAATGGGATTATTGAAGTAGA
CCTTCATATTGATTCTCTGCTTGATGATACGCACGGAATGAGTAACAGCGAAATTCTGAACTACCAACTGGACAAATTCC
GTGAAGTAATAGAGGCGAATAAAGAGAAGCGTGAGCAGAAAGTTGTGTTTATTCACGGAAAAGGAGACGGAGTGCTTCGG
AAAGCCATTATTGATGAATTGAAACGGAAACACAGCAATTACCGTTATCAGGATGCCTCTTTTCAGGAATATGGTTTCGG
GGCTACCATGGTGACTATCAAATGA

Upstream 100 bases:

>100_bases
AATCGTTCCGTTATATTTTGCGGCAAAGTTACTGTATTTTCATATAAATCCCTATCTTTGTTACCCGTTTTAAGTTTGAA
TTTTAATAGGAGATACAATA

Downstream 100 bases:

>100_bases
TTCCGGTGTACTTGTAAATGATGCTGAAAATGTATTTGCCGGAATAAAGTCCGGCAGGTGGGATGAGATAAAAAGAAGGG
TGGAGAACTTGACCGGTCTC

Product: putative DNA mismatch repair protein

Products: NA

Alternate protein names: Smr Domain-Containing Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKIGDKVRFLSEVGGGIVTGFKGKDFVLVEDADGFDIPMPIRECVVIEADDYNIKRKPAATAPKQEEPAKPAKPEMPVIQ
RQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNE
MERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYVSAEEIQSALLQKK
FVDKPKSQPIMKPNHGQSGKNGIIEVDLHIDSLLDDTHGMSNSEILNYQLDKFREVIEANKEKREQKVVFIHGKGDGVLR
KAIIDELKRKHSNYRYQDASFQEYGFGATMVTIK

Sequences:

>Translated_354_residues
MKIGDKVRFLSEVGGGIVTGFKGKDFVLVEDADGFDIPMPIRECVVIEADDYNIKRKPAATAPKQEEPAKPAKPEMPVIQ
RQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNE
MERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYVSAEEIQSALLQKK
FVDKPKSQPIMKPNHGQSGKNGIIEVDLHIDSLLDDTHGMSNSEILNYQLDKFREVIEANKEKREQKVVFIHGKGDGVLR
KAIIDELKRKHSNYRYQDASFQEYGFGATMVTIK
>Mature_354_residues
MKIGDKVRFLSEVGGGIVTGFKGKDFVLVEDADGFDIPMPIRECVVIEADDYNIKRKPAATAPKQEEPAKPAKPEMPVIQ
RQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNE
MERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYVSAEEIQSALLQKK
FVDKPKSQPIMKPNHGQSGKNGIIEVDLHIDSLLDDTHGMSNSEILNYQLDKFREVIEANKEKREQKVVFIHGKGDGVLR
KAIIDELKRKHSNYRYQDASFQEYGFGATMVTIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39990; Mature: 39990

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGDKVRFLSEVGGGIVTGFKGKDFVLVEDADGFDIPMPIRECVVIEADDYNIKRKPAA
CCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCC
TAPKQEEPAKPAKPEMPVIQRQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNY
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCEEEEEEECCCE
YLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNEMERVAVQLIAFKDGKPAAIK
EEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEC
PAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYVSAEEIQSALLQKK
CEEEEEEEEEEEEEEEEEECCCHHHHCCCHHEEHHHHCCCCHHHEEEEHHHHHHHHHHHH
FVDKPKSQPIMKPNHGQSGKNGIIEVDLHIDSLLDDTHGMSNSEILNYQLDKFREVIEAN
HHCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
KEKREQKVVFIHGKGDGVLRKAIIDELKRKHSNYRYQDASFQEYGFGATMVTIK
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEC
>Mature Secondary Structure
MKIGDKVRFLSEVGGGIVTGFKGKDFVLVEDADGFDIPMPIRECVVIEADDYNIKRKPAA
CCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCC
TAPKQEEPAKPAKPEMPVIQRQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNY
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCEEEEEEECCCE
YLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNEMERVAVQLIAFKDGKPAAIK
EEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEC
PAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYVSAEEIQSALLQKK
CEEEEEEEEEEEEEEEEEECCCHHHHCCCHHEEHHHHCCCCHHHEEEEHHHHHHHHHHHH
FVDKPKSQPIMKPNHGQSGKNGIIEVDLHIDSLLDDTHGMSNSEILNYQLDKFREVIEAN
HHCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
KEKREQKVVFIHGKGDGVLRKAIIDELKRKHSNYRYQDASFQEYGFGATMVTIK
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA