| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347585
Identifier: 29347585
GI number: 29347585
Start: 2735602
End: 2735958
Strand: Reverse
Name: 29347585
Synonym: BT_2175
Alternate gene names: NA
Gene position: 2735958-2735602 (Counterclockwise)
Preceding gene: 29347589
Following gene: 29347584
Centisome position: 43.7
GC content: 33.61
Gene sequence:
>357_bases ATGTCTAATTTAAATTCATATATTTATAGCCGTCAAATTAATGTAAGATATATGCGGAGACTAAAACTATATTATTTGTT TTTCCACAGTACGTTGAAAATAAACGTTCCGCTGTCTATATTAGGTGCACTTATTGTATCAAAAGCTGACTGGAGCTTGT TTTGGGAAGCTTTTCCTTATCTATTGGGTGGCTGGGGAATTGTTGCCAGTTTGCTTTATAAGGAGTTTCTTGAAAAGGAA GCCTACTTTTTCTATTATAATTCCGGAATTCTGAAACGGAACTTGATTGTCTTTGTGTTTGCTGTATATTGGTCTGTACT TTGGATTGTAAAATTATGCATCACTTGCTTGAAATAG
Upstream 100 bases:
>100_bases GTTGTTCCTAATTAAAGTCGGTGGAGACGTTCGTAAAATGAAAGGAAACTTTCAGCGAATTTGGAATAAAAACAGAAATT GAAGCCTGGTTTTTAGTAAG
Downstream 100 bases:
>100_bases ATAGTATTATTAAGAATTTCGGTACCAGGCAACTGCTGACTGATGTTTACCTGAAAATAAATACAGGTGATGTTATTGGA TTGTTCGGCAGGAACGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSNLNSYIYSRQINVRYMRRLKLYYLFFHSTLKINVPLSILGALIVSKADWSLFWEAFPYLLGGWGIVASLLYKEFLEKE AYFFYYNSGILKRNLIVFVFAVYWSVLWIVKLCITCLK
Sequences:
>Translated_118_residues MSNLNSYIYSRQINVRYMRRLKLYYLFFHSTLKINVPLSILGALIVSKADWSLFWEAFPYLLGGWGIVASLLYKEFLEKE AYFFYYNSGILKRNLIVFVFAVYWSVLWIVKLCITCLK >Mature_117_residues SNLNSYIYSRQINVRYMRRLKLYYLFFHSTLKINVPLSILGALIVSKADWSLFWEAFPYLLGGWGIVASLLYKEFLEKEA YFFYYNSGILKRNLIVFVFAVYWSVLWIVKLCITCLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14078; Mature: 13947
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLNSYIYSRQINVRYMRRLKLYYLFFHSTLKINVPLSILGALIVSKADWSLFWEAFPY CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHCCCHHHHHHHHHH LLGGWGIVASLLYKEFLEKEAYFFYYNSGILKRNLIVFVFAVYWSVLWIVKLCITCLK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLNSYIYSRQINVRYMRRLKLYYLFFHSTLKINVPLSILGALIVSKADWSLFWEAFPY CCHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHCCCHHHHHHHHHH LLGGWGIVASLLYKEFLEKEAYFFYYNSGILKRNLIVFVFAVYWSVLWIVKLCITCLK HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA