| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is nfrA2 [H]
Identifier: 29347554
GI number: 29347554
Start: 2698955
End: 2699692
Strand: Reverse
Name: nfrA2 [H]
Synonym: BT_2144
Alternate gene names: 29347554
Gene position: 2699692-2698955 (Counterclockwise)
Preceding gene: 29347560
Following gene: 29347550
Centisome position: 43.12
GC content: 43.09
Gene sequence:
>738_bases ATGTTTGAAACCGTAAAGAACAGAAGAACAATCCGGAAATACCAGCAAAAAGATATTGCTCCTGATTTGTTAAATGATTT GCTCGAAACCTCTTTCCGCGCTTCTACGATGGGAGGGATGCAACTTTATAGTGTTATAGTGACTCGCGATGCAGAAATGA AAGAGAAACTTTCTCCTGCTCATTTCAATCAGCCGATGGTAAAAGGGGCACCTGTCGTGCTTACTTTTTGTGCCGATTTC CGCCGTTTCAGCAAGTGGTGTGAACAGAGAAACGCTGTTCCCGGCTACGATAATTTAATGTCTTTTATGAATGCGTCTAT GGATACCTTGTTGGTTGCGCAAACCTTCTGCACGTTAGCTGAAGAGGCAGGCTTGGGTATCTGTTATCTGGGAACGACTA CTTATAATCCGCAAATGATCATCGATACACTTCAACTGCCGAAACTGGTATTCCCTATTACGACGATCACAGTCGGCTAT CCGGACGGTACTCCGGCCCAGGTGGACCGCTTGCCTCTCGAAGCTGCCGTGCATCAGGAAGTTTACCATGATTATACTCC GGAAGACATCGATCGCTTGTACGAGTATAAAGAATCACTGCCGGAAAATAAACAGTTTATAGAAGAAAATAAGAAAGAAA CTCTGGCACAAGTATTTACGGATGTACGTTATACAAAGAAAGACAATGAATTTATGTCTGAGAACTTGTTGAAAGTGCTT CGTCAACAAGGATTCTAA
Upstream 100 bases:
>100_bases GCTTTTTGTTCATGGCTTTAAGTTTTCCAAAAAGAAAATTAGATTATTTCATTGATATGGCAAAATAATATTTCTTTTTG TATCTTTGCAAAAAAAAGAT
Downstream 100 bases:
>100_bases TGATAAGTAATAGGTAATAGCTATGCGGACTGCACTTGTTTATGCAGCTTCGATATTACCTATTACTTAATACCTATTAC TTGAATTATGCTTTCTTCTT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NAD(P)H-dependent FMN reductase; NAD(P)H-dependent nitroreductase; NAD(P)H-dependent oxidoreductase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MFETVKNRRTIRKYQQKDIAPDLLNDLLETSFRASTMGGMQLYSVIVTRDAEMKEKLSPAHFNQPMVKGAPVVLTFCADF RRFSKWCEQRNAVPGYDNLMSFMNASMDTLLVAQTFCTLAEEAGLGICYLGTTTYNPQMIIDTLQLPKLVFPITTITVGY PDGTPAQVDRLPLEAAVHQEVYHDYTPEDIDRLYEYKESLPENKQFIEENKKETLAQVFTDVRYTKKDNEFMSENLLKVL RQQGF
Sequences:
>Translated_245_residues MFETVKNRRTIRKYQQKDIAPDLLNDLLETSFRASTMGGMQLYSVIVTRDAEMKEKLSPAHFNQPMVKGAPVVLTFCADF RRFSKWCEQRNAVPGYDNLMSFMNASMDTLLVAQTFCTLAEEAGLGICYLGTTTYNPQMIIDTLQLPKLVFPITTITVGY PDGTPAQVDRLPLEAAVHQEVYHDYTPEDIDRLYEYKESLPENKQFIEENKKETLAQVFTDVRYTKKDNEFMSENLLKVL RQQGF >Mature_245_residues MFETVKNRRTIRKYQQKDIAPDLLNDLLETSFRASTMGGMQLYSVIVTRDAEMKEKLSPAHFNQPMVKGAPVVLTFCADF RRFSKWCEQRNAVPGYDNLMSFMNASMDTLLVAQTFCTLAEEAGLGICYLGTTTYNPQMIIDTLQLPKLVFPITTITVGY PDGTPAQVDRLPLEAAVHQEVYHDYTPEDIDRLYEYKESLPENKQFIEENKKETLAQVFTDVRYTKKDNEFMSENLLKVL RQQGF
Specific function: Reduces FMNH(2) to FMN, with NADPH as reductant. It also reduces nitroaromatic compounds, quinones, chromates and azo dyes. It could supply the reduced form of FMN to luciferase-like protein and contribute to the degradation of aromatic compounds [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 28185; Mature: 28185
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETVKNRRTIRKYQQKDIAPDLLNDLLETSFRASTMGGMQLYSVIVTRDAEMKEKLSPA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCH HFNQPMVKGAPVVLTFCADFRRFSKWCEQRNAVPGYDNLMSFMNASMDTLLVAQTFCTLA HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH EEAGLGICYLGTTTYNPQMIIDTLQLPKLVFPITTITVGYPDGTPAQVDRLPLEAAVHQE HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH VYHDYTPEDIDRLYEYKESLPENKQFIEENKKETLAQVFTDVRYTKKDNEFMSENLLKVL HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RQQGF HHCCC >Mature Secondary Structure MFETVKNRRTIRKYQQKDIAPDLLNDLLETSFRASTMGGMQLYSVIVTRDAEMKEKLSPA CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHCCCH HFNQPMVKGAPVVLTFCADFRRFSKWCEQRNAVPGYDNLMSFMNASMDTLLVAQTFCTLA HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH EEAGLGICYLGTTTYNPQMIIDTLQLPKLVFPITTITVGYPDGTPAQVDRLPLEAAVHQE HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH VYHDYTPEDIDRLYEYKESLPENKQFIEENKKETLAQVFTDVRYTKKDNEFMSENLLKVL HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RQQGF HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]